LOCUS       WKY05248.1              1007 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2073
PROTEIN_ID  WKY05248.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005901"
                     /note="NIPPO_CHRIV.G9741.T2"
     intron_pos      7:2 (1/24)
     intron_pos      46:1 (2/24)
     intron_pos      86:2 (3/24)
     intron_pos      112:1 (4/24)
     intron_pos      160:0 (5/24)
     intron_pos      198:2 (6/24)
     intron_pos      262:1 (7/24)
     intron_pos      319:2 (8/24)
     intron_pos      356:0 (9/24)
     intron_pos      395:0 (10/24)
     intron_pos      433:0 (11/24)
     intron_pos      452:0 (12/24)
     intron_pos      481:2 (13/24)
     intron_pos      507:0 (14/24)
     intron_pos      547:0 (15/24)
     intron_pos      586:2 (16/24)
     intron_pos      638:0 (17/24)
     intron_pos      691:0 (18/24)
     intron_pos      746:2 (19/24)
     intron_pos      804:0 (20/24)
     intron_pos      838:1 (21/24)
     intron_pos      869:2 (22/24)
     intron_pos      914:0 (23/24)
     intron_pos      944:2 (24/24)
BEGIN
        1 MLLCRTSHCV YDLAFKPDGS ELLVAADNKV IIYDGIDGTL LQVLKGHKDL VFAVAWSQDG
       61 ETFASGSLDR SVILWTEQHE GTLKYSHSDA IQCLAFSPVT SLLLSCAMGD FGLWSADEKN
      121 VQKQRISGRC ASCAWSRDGS LFAIGTYDGF VHLKKADNFQ SDEYVAKIER PGGEPVWAIR
      181 FCAPRHQDDM SRRHYDSEPS SELLVVTDWS RKVGFYDLDG NSIKRDDMTL TYDPTCVEFI
      241 TGGQFLLIGG SGRQVTLHTR LGTEIGTVAQ MDSWVWCVRV RPVSNPSTVV VGCVDGTIAC
      301 YNLMFSTIHG LHKERYAFRD NMTDVVVQHL IHHTMTRIRC HELVKKVAIY GHKLAVQLTD
      361 RLHIYRQIKG DGENEQLEYT LCERINKAFD CSLLVVCSNH LILCDERRLQ CYDHKGLKQR
      421 EWQLESAIRY IKVIGGPPGR ETILIGLREG QVCKLFVDNP FPVQVLKLNG PIKCIDISAS
      481 RKHIAVVDDS GLCVVFDAKT KEVLFEEPNC NSVAFNSDNE EIICYSGSSK LTVRARGYPG
      541 HQQRMFGFVV GFSGNKVYCL HIYAMQALEV PFSNQLYQYI ENKEYQKAYD LACLGVTRED
      601 WQILGQDAIS NFNCEIALKA FARYKDYRSL QLVQEIKEMM AANEPEYILR AHVLCYEGKF
      661 REAAALYRSN GDENRAMQLF TDLRMFEDAQ EVMTTASGET QRMLMRKRAD WARDSNQPKV
      721 AAEMLISSGD LDKAVLLITE NDWMDLAINV MRKLERSDVD SLRRLAAYFI RKSEFGLAGR
      781 IYGSINDIKA MAQMHVAAGH WTDAFAIADR YPKFVEDVYL PYARYLAERD HFEEAQKAYH
      841 RAGRDQEALR VLEQLTGNAV DENRFADAGY YHWLLSMQYL ERSKDNPSLI PKYEASAKLA
      901 EMYYAYHAIF LYCNQPFTRH SPETLLNMAR YLSAQELVPN ISLVLICYTI ARIGRELGAF
      961 KLARDTLDLL GNLRIPPRLQ RDVELMTVNI RAKPFSDAED LLPVCHR
//