LOCUS       WKY05184.1               841 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2011
PROTEIN_ID  WKY05184.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005869"
                     /note="NIPPO_CHRIV.G9709.T2"
     intron_pos      30:0 (1/20)
     intron_pos      67:0 (2/20)
     intron_pos      120:0 (3/20)
     intron_pos      151:0 (4/20)
     intron_pos      175:1 (5/20)
     intron_pos      213:0 (6/20)
     intron_pos      245:1 (7/20)
     intron_pos      297:1 (8/20)
     intron_pos      358:1 (9/20)
     intron_pos      387:1 (10/20)
     intron_pos      411:0 (11/20)
     intron_pos      441:0 (12/20)
     intron_pos      483:0 (13/20)
     intron_pos      633:0 (14/20)
     intron_pos      657:0 (15/20)
     intron_pos      684:0 (16/20)
     intron_pos      728:0 (17/20)
     intron_pos      756:0 (18/20)
     intron_pos      781:0 (19/20)
     intron_pos      821:0 (20/20)
BEGIN
        1 MIVSAGNDGF VRIINSETSE ILGATQLQQN DKVRAITWCS ASRPDLFAIQ YFQHPTEFES
       61 IESGSERSNV RRTDVALVPA WVSAAPVGAS FAKGGRMATH YRQWDEAKQI WHYTVEVRQL
      121 PVKEELYQSA MELQNAQDAN SFGSYCEDRR ILWTFLAALS NKQGRQEYVK ILGFGKNERM
      181 SPDTRASRRS TASHEVTQLT DLMSSMNYAS HKENGEDAHS VSDDDSSTAD DVFARQPDLD
      241 WSQLHANAWS MLDSLIENED EDVVNELLAQ KNYEVAFMFA RNNSKLMHLV TSAYISEQLA
      301 APQRLLTLIA TESFDQLLES FPREQWSRLL ALVVARVDRT RLAHIMRKVA TKWIALGGEE
      361 SVHAAFAAVL AHDVGLLLKA NRSYPLDERI RQALVLRSLT GDAGDEEFEQ LLCTYCENLI
      421 AGGVSDAAWR LLSNLNTKNE RLLSLRHDLF VICGGEQRTM KKEPENPRLK HASAINNALH
      481 AARSPHRHPV FTPTQVPSSS SSPLGSGQQR PRLDHRNPSD VHSATSLSSA SNYSGYPPVP
      541 SIPSTGYPPV PSVPGGYPPV PSIPGGYPPV PAPPLPAAMP STMFAPPQPP LPPPVAPPGH
      601 QVIPSNGYVH TQPGFNPPIP TSMMPPPATQ YMSNTVQSIS PPAPPLSTGG GDSATHDGKS
      661 HGWNDPPPLA ARKATPPVAP VFEVNWKPLE PAPVTLPNAL PGVVSGVPQR PQSSTSQHQP
      721 ETREIPQVTL TPEDQAIMDR LQQLVDAILS VNRSPVALHK IDEAKTRFGC ELAPRLASGK
      781 LSLTIRQLLW QCTEHSSRGN YREAVVTCGQ MVRCGGDFVE VSAFLPALKS LFSLAQSTFS
      841 R
//