LOCUS WKY05014.1 298 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-1839
PROTEIN_ID WKY05014.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005765"
/note="NIPPO_CHRIV.G9605.T2"
intron_pos 38:2 (1/7)
intron_pos 76:2 (2/7)
intron_pos 123:0 (3/7)
intron_pos 161:1 (4/7)
intron_pos 190:2 (5/7)
intron_pos 220:0 (6/7)
intron_pos 259:1 (7/7)
BEGIN
1 MLLLGILLIS VRFIDCLTLC DPPNSLVRVI GGSTAPIGNY PWQAAVVFYD GSEQAMMCGA
61 TIVDDRWVLT AAHCVMNTWK TAFILTGLGT VTDPRHTVHV EEAVIHPDYD ENEIINDIAL
121 VKSKKSLLRR GVTAVCFTRD DTRLLASADT AIVLGFGLHI VSRTGDELTM GVSDVILGTT
181 LPIIPRRQCQ SEWSILSGGT MRITDRQICA GSLLHGTAPG DSGGPLLVKD PLGRLVQVGV
241 TSYGAGGVQG LLDQSTYPGV YTRVSPYIPW MELVTNSASV SLELIAFLGL FIFCSCEG
//