LOCUS       WKY04973.1               617 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1798
PROTEIN_ID  WKY04973.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005741"
                     /note="NIPPO_CHRIV.G9581.T2"
     intron_pos      55:0 (1/14)
     intron_pos      98:0 (2/14)
     intron_pos      145:2 (3/14)
     intron_pos      193:1 (4/14)
     intron_pos      238:0 (5/14)
     intron_pos      294:2 (6/14)
     intron_pos      332:0 (7/14)
     intron_pos      363:2 (8/14)
     intron_pos      406:0 (9/14)
     intron_pos      434:0 (10/14)
     intron_pos      483:0 (11/14)
     intron_pos      507:0 (12/14)
     intron_pos      552:0 (13/14)
     intron_pos      597:0 (14/14)
BEGIN
        1 MGAVAAAMPA ARRRRASSDE RSDQPPDDGP SSMYTIATSK IAIAYTTNEA ALDNYTNIFK
       61 ENDAAEDDVT RVRVSDAVKE RLQFLTLRNQ WPLVFIKGDA VGGLDELKSV AETGLLKEWI
      121 KDHQYDLIVI GGGSGGLAAA KMAAMHGKKV AVLDFVKPSP QGSTWGLGGT CVNVGCIPKK
      181 LMHQASLLGH SIKDAKMFGW KLPEGEITHN WVALKNAVQD HISSLNWGYR VQLREKQVTY
      241 INSYGCFTGP FEISATNKKG QVETLTADRF LIATGLRPRY PDNVPGAKEY CVSSDDLFAL
      301 PYPPGKTCCI GASYVSLECA GFLKGLGFDV TVMVRSILLR GFDQDMAERI RAHMKQYGVK
      361 FESAVPTKIE EIEPKSKTKP GKYRVHFSRK VSDTETEEHS EEFNTVIMAI GRDAVTRDIG
      421 LDTVGVETGR NGKVKGRREQ SLTCPYIYAI GDVLENTPEL TPVAIQAGKV LMNRLYGGVD
      481 AITEYDEVPT TVFTPLEYGT CGLSEETAIE RYGKDNIVIY HGVFTPLEYT VAEREDKDHC
      541 YCKLICVIPE KERVVGFHIL APNAGEVTQG FGIALKLGGK KSDFDRLIGI HPTVAESFTT
      601 LYQVKTLGGD QLKATGC
//