LOCUS       WKY04969.1               647 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1793
PROTEIN_ID  WKY04969.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005739"
                     /note="NIPPO_CHRIV.G9579.T1"
     intron_pos      61:0 (1/14)
     intron_pos      96:0 (2/14)
     intron_pos      143:0 (3/14)
     intron_pos      186:0 (4/14)
     intron_pos      220:2 (5/14)
     intron_pos      268:2 (6/14)
     intron_pos      290:1 (7/14)
     intron_pos      337:1 (8/14)
     intron_pos      378:1 (9/14)
     intron_pos      419:2 (10/14)
     intron_pos      461:2 (11/14)
     intron_pos      519:0 (12/14)
     intron_pos      553:1 (13/14)
     intron_pos      610:0 (14/14)
BEGIN
        1 MCSRAFRSVE KDSKVLSYGD VVLYESDLQT LNPGCWLNDN IISFCCEYLL SRCSAEVKNQ
       61 VAIVSAATCE LIRYSGDVEI IREVFTSHGF FSKEKVLFVL NDRDDPSNIG GSHWSLLVLE
      121 RPLSRFAYYD SWRPAKVALA NQLVNTVVPF LDNREPSFRV YDCPQQQNSN DCGMYVIEFV
      181 RRELQLSEKE DVLTDIDSRY IELERRRWQD IILSLSKSDH MITPSFSIVQ DPKWLIFIIR
      241 APYAKIADTE IEYGDDIFMF SAPPYYLRVH LPREVVDDNT GTAKYDSSLG EFTVRVPKKN
      301 VGENFPGLDM ICELLNPQKK ISAKMLVEEL RDSDEGEAED DSEYYTEQNV VDIGAGCSEN
      361 CTDSYGYGFA WRRKGILGQL SKEIGDLVQL SDPERTAIPD RKTECAEFDE KKFDAERYLL
      421 DFLDPDDDLR RIIAQDFQLS LEVDAEDRQR LKDFPKKRLP TLSPEEQRLV ALSLVDIVFA
      481 FAYDSRINDW ETCCETGWNV TKLSPTLVFL CQWSSAKEAF VACTRRSLCY PLYRNWELSM
      541 KVVEDTKSII NKGRTALLHV LSKLHGIFVC SGEFRYLFND LFISDYVLWI QSVDEAILNN
      601 LQKEVADVTL CKADIDLNLE ELELEGQMAS LKVKETTPLD SDDEPDP
//