LOCUS       WKY04907.1               638 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1731
PROTEIN_ID  WKY04907.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005708"
                     /note="NIPPO_CHRIV.G9548.T1"
     intron_pos      19:0 (1/16)
     intron_pos      62:1 (2/16)
     intron_pos      93:0 (3/16)
     intron_pos      131:0 (4/16)
     intron_pos      162:0 (5/16)
     intron_pos      185:1 (6/16)
     intron_pos      221:0 (7/16)
     intron_pos      253:0 (8/16)
     intron_pos      287:0 (9/16)
     intron_pos      334:0 (10/16)
     intron_pos      373:0 (11/16)
     intron_pos      406:2 (12/16)
     intron_pos      452:0 (13/16)
     intron_pos      513:0 (14/16)
     intron_pos      545:1 (15/16)
     intron_pos      591:0 (16/16)
BEGIN
        1 MLIGNREMLR LSTTVRMLAT RMPIPTELHN DLEDVANRMR ISAIEMTCAS KSGHPTSSTS
       61 AAEIMSTLFF HEMKYEVADP KCASADRFVL SKGHACPILY AAWEEAGLLS RDQVMSLRKI
      121 NSDIEGHPTP RLNFIDVATG SLGQGLSCAA GMAYVGKYID KASYRVYCLL GDGESAEGSV
      181 WEAAAFASYY KLDNLVAIVD VNRLGQSQET SLGHHVEVYQ ARFAAFGFNA IVVNGHDIDE
      241 LINAYETARN TKDKPTAILA KTFKGQGIEG VADKDNWHGK PVPIEKIEAI KGKLHGSKKG
      301 KLTPKKPTED APAVDLKIGS IKMAPPSYKM GEKVATRAAY GTALAKLGDA NPRVIGLDGD
      361 TKNSTFSEKL LQKHPQQFIE CFIAEQNLVG VAVGAQCRNR TIPFTSTFAA FFTRATDQIR
      421 MAAVSFANLK CAGSHVGVSI GEDGPSQMAL EDLAIFRAVP GSTVFYPTDA VSAERATELA
      481 ANIKGIVFIR TGRPALPVLY KNDEPFAVGK AKIVKESPKD RILLIGAGVT LYECLKAAEQ
      541 LEKEGTHCCV LDPFTIKPID QELIMHHARR VGGRILTVED HYPAGGLGEA VSAAVADNAG
      601 IRVHSICVQE VPRSGPPDEL MDKFGISAKH IVEAVKKY
//