LOCUS       WKY04886.1               577 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1711
PROTEIN_ID  WKY04886.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005693"
                     /note="NIPPO_CHRIV.G9533.T1"
     intron_pos      37:0 (1/14)
     intron_pos      74:0 (2/14)
     intron_pos      114:0 (3/14)
     intron_pos      137:0 (4/14)
     intron_pos      166:0 (5/14)
     intron_pos      196:0 (6/14)
     intron_pos      215:0 (7/14)
     intron_pos      248:2 (8/14)
     intron_pos      283:0 (9/14)
     intron_pos      316:0 (10/14)
     intron_pos      395:0 (11/14)
     intron_pos      447:0 (12/14)
     intron_pos      496:0 (13/14)
     intron_pos      538:0 (14/14)
BEGIN
        1 MLALLLVVVP IGLMSAAVHQ EVVYVGQVYQ KPLSQKASVS GDRGDALPSW LTVKDGNLMG
       61 IPGEGDIGTH PIKIFSRSKL EKEYELVVKE DNRNPCGDED TYWVEALYLK DGPIVDRLNA
      121 ALDVAEGLSV DTDELKVYSY NYSRQIRKVE AIGGDEVAAF SVLYKVACGD DLDTAASEMD
      181 AFLTAMDNYE YDYIVLTKGR VVPGVESSTG ASKKLSTTTA EITTSRTTRK VDNPPVKLNS
      241 LSGFTCTRGV YCEMVIPEHT FKDVEDGDTF KLRLTVQPIG RKDSWMFYDH KKVKGVPLEE
      301 GEHEFRLEAR DKSGQMASAP FKVSVTASFP YNHLIQLELD TPVARFSRPS SLSTFVHQLA
      361 TAFRSKPDAV TIRNITGNGT KTQVTWSNNT VPHKVCANDA LDSIRYTMLT RQRSQTKIEF
      421 VKMIGSQFHV RKASLELHGS CVDKDVEPIS TAPTMEAADQ AAFPWTVFFG VLLLLLLLAI
      481 LLLAVCSAMK KSKKKEKPSD YMGKGMPVVF PEEVAEDVEM AHASTPMLTK EERPPLKVSQ
      541 HENPLYKPPP PLAAASPRLG SAGNVPNQRM PPSYVPP
//