LOCUS       WKY04848.1               578 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1673
PROTEIN_ID  WKY04848.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005671"
                     /note="NIPPO_CHRIV.G9511.T2"
     intron_pos      57:1 (1/11)
     intron_pos      153:0 (2/11)
     intron_pos      204:1 (3/11)
     intron_pos      241:2 (4/11)
     intron_pos      291:2 (5/11)
     intron_pos      334:1 (6/11)
     intron_pos      367:0 (7/11)
     intron_pos      384:1 (8/11)
     intron_pos      471:1 (9/11)
     intron_pos      498:0 (10/11)
     intron_pos      538:2 (11/11)
BEGIN
        1 MRLLLLHLVA LSHCGASDIT RRAIFDCSRM DTSYCCTTRV RTLCADQCEG IFCSDGGAEM
       61 SQFNIEMMTT PSPMTQPPLD SELRVQQAHD GDARTSRTLS PQLPFTEAPP RVTSSTGFPT
      121 LIPFEPNIDA VDISQAKFDV TPEPIIHSTV VKSIHHRSRT TPDPRIIKPP ESLVVIGEYD
      181 YVDAENKTPI QVPAATVAPQ ANSAVVFTAK NDGPVMPQSF ISEEAIVERG VRGQSLPKNP
      241 AKLCSQVPTH HRCRTRLAPF KRRAMIASKR TFRTPHLFIG PPRLYRRRSA RPTPRWYVKL
      301 LPQQTPWPDV TEKLPAFAVD GIASKPVDIA SHKGGIGSLI RNYATGLTKM HPYPENGDFI
      361 ESNALQVASA SRTTQSPIKI RIKPVKPHRS GKKPRPTTPK TTFHEGPEST DGDEITEATQ
      421 APRRPPSIPR PPTAIRHSQS GSVQPTAVQQ EKCGVAPDFT PCVSSEEASH ALLECCRRKN
      481 LPPGCLALCR YDITQAEVRS AMDRGQCGLF SVTPYLECAS QGKDNSECCR HKGIASKTGP
      541 QCEQFCRPTR GLTPLGLQHI VCGNAIGDML RCHHAGIR
//