LOCUS WKY04832.1 350 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-1657
PROTEIN_ID WKY04832.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005666"
/note="NIPPO_CHRIV.G9506.T2"
intron_pos 33:1 (1/5)
intron_pos 74:0 (2/5)
intron_pos 134:0 (3/5)
intron_pos 198:0 (4/5)
intron_pos 257:1 (5/5)
BEGIN
1 MDLVSRFSQS AKTNPFSFPA RTASCSSPKT EEAGQVELGS LKYYALCGLG GIISCGTTHT
61 AIVPLDLVKC RIQVNPEKYK NIATGFRTTV AEEGSRALVK GWAPTCVGYS LQGLGKFGFY
121 EVFKKKYAEL LGEEYAYLYR TSLYLAASAS AEFFADILLA PMEATKVRVQ TSPDAPPTLR
181 GCAPMIYRTE GLSGFYKSIV QGLVPLWLRQ IPYTMMKFTC FERTLELLYK YVVPKPRSEC
241 SKPEQLVVTF VAGYIAGIFC AIVSHPADTV VSKLNQDAGS GIGGIIKKLG FMGLWKGLIA
301 RIIMIGTLTA AQWFIYDSVK VVLNLPRPPP PTMPESLRLK LEAAAKAQQK
//