LOCUS WKY04760.1 898 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-1582
PROTEIN_ID WKY04760.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005627"
/note="NIPPO_CHRIV.G9467.T2"
intron_pos 24:0 (1/29)
intron_pos 47:1 (2/29)
intron_pos 65:1 (3/29)
intron_pos 102:1 (4/29)
intron_pos 382:1 (5/29)
intron_pos 400:1 (6/29)
intron_pos 422:1 (7/29)
intron_pos 444:1 (8/29)
intron_pos 462:1 (9/29)
intron_pos 484:1 (10/29)
intron_pos 506:1 (11/29)
intron_pos 528:1 (12/29)
intron_pos 546:1 (13/29)
intron_pos 564:1 (14/29)
intron_pos 582:1 (15/29)
intron_pos 604:1 (16/29)
intron_pos 626:1 (17/29)
intron_pos 644:1 (18/29)
intron_pos 666:1 (19/29)
intron_pos 688:1 (20/29)
intron_pos 710:1 (21/29)
intron_pos 728:1 (22/29)
intron_pos 750:1 (23/29)
intron_pos 768:1 (24/29)
intron_pos 790:1 (25/29)
intron_pos 823:1 (26/29)
intron_pos 841:1 (27/29)
intron_pos 863:1 (28/29)
intron_pos 885:1 (29/29)
BEGIN
1 MRLLVVVLAA LLAAVSHAAP VPALEDVVAD IAKTDVDRVR NLAKQSKEVV VKVGEKLGGA
61 AEAVAKIAEP LKSFAYTAAS AALTTLGANN PENVPGSDNN HAPPFRVEAR LHTLVDRQRR
121 QHVQPNGGFP NNQYPQQDRS NTNGNGNYRS NGGNDEQQRR AYEQQYRERE QRQRSDEARR
181 RCAPRAPPPA PQTRRNCPPR RPPPQELRLP PTPPPQPIRR NCRNRPTPTH PPPIHAPQVI
241 CRPAAPPPTY PPPPTPQPQR RVDCVRSAPP PTYPPPQQQQ YYPCQQQQQP QPQPPCYQQT
301 PAPCPQQQPC YQNSPCQQRR DPRGENGREN EFRAATPGCV APANHMRPAD CQGSVKIVSV
361 NAAGVVEHYM YKIGKDTGEV LATFATEVRD KFHESAGRLG TASGKVGDST QSAADGVVGA
421 IGGAAQSAKD GVTHVAHKTG EAVGDAGHAV AGAATDAANW TGEKLGAAVD AVGAGAQDVG
481 QAAGDAAGAV ADGAGSAAKS VGGWFGSAFD TVKSGVTSVG SAVADTASGA ANTVGEGASA
541 VAGAAGDAAS KVGEGASAVG GAVGDAASAV GEGAVSAGKA VGDAATAVGD GAVSAGKTVG
601 GAVGDAAGAV KDGVVSAEDA VGDTASGAWG ALKSGAGAVA DTAGSAAGAV KDGVVSAGET
661 VGDAASGAAG AVRDGASAAV GAVGDVAGGA VDAIKDGAHT VGEGVSNAAS SAYGSAKDGF
721 SAVGGAIGDA AAATRDGAAS VGGAIVDGAS SAANTVKDGA SAAADGIANV GSSAWEGVKG
781 AGQAVGDTAA DIGSSAWEGA KNAGSAVGDG VKSAGAAVGD TASGAWEGLK NTGKGIGDAA
841 SGAASSAWEG TKNAGKAVGD TAGDAASAVG GFVSDVASGT RNAIGDTLKS AGDAVSSK
//