LOCUS       WKY04670.1              1264 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1492
PROTEIN_ID  WKY04670.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005576"
                     /note="NIPPO_CHRIV.G9416.T3"
     intron_pos      12:0 (1/31)
     intron_pos      41:1 (2/31)
     intron_pos      98:0 (3/31)
     intron_pos      131:0 (4/31)
     intron_pos      166:0 (5/31)
     intron_pos      215:0 (6/31)
     intron_pos      257:2 (7/31)
     intron_pos      304:0 (8/31)
     intron_pos      347:0 (9/31)
     intron_pos      400:2 (10/31)
     intron_pos      454:0 (11/31)
     intron_pos      479:2 (12/31)
     intron_pos      523:0 (13/31)
     intron_pos      562:0 (14/31)
     intron_pos      597:0 (15/31)
     intron_pos      630:1 (16/31)
     intron_pos      659:0 (17/31)
     intron_pos      702:2 (18/31)
     intron_pos      759:0 (19/31)
     intron_pos      803:0 (20/31)
     intron_pos      847:0 (21/31)
     intron_pos      881:1 (22/31)
     intron_pos      915:2 (23/31)
     intron_pos      945:0 (24/31)
     intron_pos      996:0 (25/31)
     intron_pos      1035:2 (26/31)
     intron_pos      1073:0 (27/31)
     intron_pos      1127:0 (28/31)
     intron_pos      1173:0 (29/31)
     intron_pos      1212:0 (30/31)
     intron_pos      1243:0 (31/31)
BEGIN
        1 MRTALSCVDA LNQKSSSLVH CSVEVPVLLM SFEIGARVET EKTGKGRVAF CGEVQFSDGE
       61 WVGVILDEPR GKNNGTVQGV QYFTCEPNYG LFIRPTQLKP ESARSRASAL RTPAARKEVT
      121 PTTKARASPA GSPKVSPSVS MERLSKAAGP KRVLSSSKLA DTANEPKMSR EGSTLSQAGS
      181 EKGEKPKEKP KSPPVEKSPE KPESVMDKVK KLQESASPMT PLSPVHTTVP SGMDEGTEQE
      241 YLRLQVKDLS EKLETLRMKR KEDHGKLVDY ERSKIQLQAL MELKSKMADQ LLELQRQLQE
      301 ARKEAVENRE WREANQDELS SAAEQLEMAT IDKEMAEERA EALQAELDSL KLKNEELEAD
      361 LGILREEMAA GGGGVISEGN SVQLKQLELQ NERLKEALIK LRDINAAAQM EKVQAVREAE
      421 VLRNENVELI RAAEIARKTA LDCDMRIHDY QEQIEAAMGA EEMVMNLANK NMEMETQIRQ
      481 LEADRDELEA HRDMDEQMLE EQKLVEKALL GEIEGLHIRI NDLQQRMKQE EDHRDELVST
      541 IMKFRKKVGE QNEEIQELKD QVLRYQEELV GHKSEENSMA SIVSQMQVNV NRTFAESVER
      601 QISAIEVEFA RKQMGYLKQF LPDNFTKAGG DNDAVILNVL FPRLSAKAKL LAKLIAEKFP
      661 GVPGGTRREH VTKSHKAEQW AHSARIAYIM NALVAVCGQF ESALSSISLE DLARLAQLQP
      721 EMSAQERVVD GYLELLKQSR LDAETSLENM EKVVTYFQNV LSVNVSADSC DTPSWLRNVC
      781 QQLVSGIAWC KVNNQRISFF LKPGLEGSDV AELVKTIGDE LAQCEQLAIR AGKRVPTDNH
      841 LKLTPEVSDD IQSAVQHLEK LALILNETCG IASVQININP ELDGFDSSRL KEMIHGEIEK
      901 THGSITVEKT YEPINKFLWT LRETLSKLFS ALESGAMEVD PRDKGFPPVL ERAHLRKQAA
      961 AEAEGLRWQL EKKDMEILEL KKTIKSRLDD ISNYKLRLDM AEARIESAGK QDNVKVQHLE
     1021 AKIEQLVTDN KKKQIEFDET MDALQKELKE CERENAELKQ MAKNFSRKTL LENIQRLETR
     1081 TTAPSVQSSP VGISSLGREE AALLEQQLSE NREALRRATL QIIQLKSELA IAQSRGGVLR
     1141 LPDMVCGPET LKAKENDSVL ELISKEVEQL KRDELKYMVF IPNPSRSRHL QEQDRQRFEK
     1201 EREAYNYRVQ TLRTRLHQYW KDICPGHAFP NLFGVSAQSQ PKVPEVKYGS QAFKDIVNNW
     1261 GVKA
//