LOCUS       WKY04669.1              1276 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1494
PROTEIN_ID  WKY04669.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005576"
                     /note="NIPPO_CHRIV.G9416.T2"
     intron_pos      12:0 (1/32)
     intron_pos      41:1 (2/32)
     intron_pos      98:0 (3/32)
     intron_pos      131:0 (4/32)
     intron_pos      166:0 (5/32)
     intron_pos      178:0 (6/32)
     intron_pos      227:0 (7/32)
     intron_pos      269:2 (8/32)
     intron_pos      316:0 (9/32)
     intron_pos      359:0 (10/32)
     intron_pos      412:2 (11/32)
     intron_pos      466:0 (12/32)
     intron_pos      491:2 (13/32)
     intron_pos      535:0 (14/32)
     intron_pos      574:0 (15/32)
     intron_pos      609:0 (16/32)
     intron_pos      642:1 (17/32)
     intron_pos      671:0 (18/32)
     intron_pos      714:2 (19/32)
     intron_pos      771:0 (20/32)
     intron_pos      815:0 (21/32)
     intron_pos      859:0 (22/32)
     intron_pos      893:1 (23/32)
     intron_pos      927:2 (24/32)
     intron_pos      957:0 (25/32)
     intron_pos      1008:0 (26/32)
     intron_pos      1047:2 (27/32)
     intron_pos      1085:0 (28/32)
     intron_pos      1139:0 (29/32)
     intron_pos      1185:0 (30/32)
     intron_pos      1224:0 (31/32)
     intron_pos      1255:0 (32/32)
BEGIN
        1 MRTALSCVDA LNQKSSSLVH CSVEVPVLLM SFEIGARVET EKTGKGRVAF CGEVQFSDGE
       61 WVGVILDEPR GKNNGTVQGV QYFTCEPNYG LFIRPTQLKP ESARSRASAL RTPAARKEVT
      121 PTTKARASPA GSPKVSPSVS MERLSKAAGP KRVLSSSKLA DTANEKKRLT TVKSLRTPKM
      181 SREGSTLSQA GSEKGEKPKE KPKSPPVEKS PEKPESVMDK VKKLQESASP MTPLSPVHTT
      241 VPSGMDEGTE QEYLRLQVKD LSEKLETLRM KRKEDHGKLV DYERSKIQLQ ALMELKSKMA
      301 DQLLELQRQL QEARKEAVEN REWREANQDE LSSAAEQLEM ATIDKEMAEE RAEALQAELD
      361 SLKLKNEELE ADLGILREEM AAGGGGVISE GNSVQLKQLE LQNERLKEAL IKLRDINAAA
      421 QMEKVQAVRE AEVLRNENVE LIRAAEIARK TALDCDMRIH DYQEQIEAAM GAEEMVMNLA
      481 NKNMEMETQI RQLEADRDEL EAHRDMDEQM LEEQKLVEKA LLGEIEGLHI RINDLQQRMK
      541 QEEDHRDELV STIMKFRKKV GEQNEEIQEL KDQVLRYQEE LVGHKSEENS MASIVSQMQV
      601 NVNRTFAESV ERQISAIEVE FARKQMGYLK QFLPDNFTKA GGDNDAVILN VLFPRLSAKA
      661 KLLAKLIAEK FPGVPGGTRR EHVTKSHKAE QWAHSARIAY IMNALVAVCG QFESALSSIS
      721 LEDLARLAQL QPEMSAQERV VDGYLELLKQ SRLDAETSLE NMEKVVTYFQ NVLSVNVSAD
      781 SCDTPSWLRN VCQQLVSGIA WCKVNNQRIS FFLKPGLEGS DVAELVKTIG DELAQCEQLA
      841 IRAGKRVPTD NHLKLTPEVS DDIQSAVQHL EKLALILNET CGIASVQINI NPELDGFDSS
      901 RLKEMIHGEI EKTHGSITVE KTYEPINKFL WTLRETLSKL FSALESGAME VDPRDKGFPP
      961 VLERAHLRKQ AAAEAEGLRW QLEKKDMEIL ELKKTIKSRL DDISNYKLRL DMAEARIESA
     1021 GKQDNVKVQH LEAKIEQLVT DNKKKQIEFD ETMDALQKEL KECERENAEL KQMAKNFSRK
     1081 TLLENIQRLE TRTTAPSVQS SPVGISSLGR EEAALLEQQL SENREALRRA TLQIIQLKSE
     1141 LAIAQSRGGV LRLPDMVCGP ETLKAKENDS VLELISKEVE QLKRDELKYM VFIPNPSRSR
     1201 HLQEQDRQRF EKEREAYNYR VQTLRTRLHQ YWKDICPGHA FPNLFGVSAQ SQPKVPEVKY
     1261 GSQAFKDIVN NWGVKA
//