LOCUS       WKY04548.1               618 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1373
PROTEIN_ID  WKY04548.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005507"
                     /note="NIPPO_CHRIV.G9347.T1"
     intron_pos      78:0 (1/14)
     intron_pos      126:1 (2/14)
     intron_pos      159:1 (3/14)
     intron_pos      211:0 (4/14)
     intron_pos      252:0 (5/14)
     intron_pos      290:1 (6/14)
     intron_pos      331:1 (7/14)
     intron_pos      369:0 (8/14)
     intron_pos      395:0 (9/14)
     intron_pos      448:0 (10/14)
     intron_pos      478:0 (11/14)
     intron_pos      510:0 (12/14)
     intron_pos      542:0 (13/14)
     intron_pos      581:0 (14/14)
BEGIN
        1 MTRKRKVDNT QSEHHEDGDK KNRMDSYGYQ SHQNEGPSQD GQFRRSFPQK PRGGPFAGRG
       61 GHRFSNGDGN FNGDRGGRYG GGRDDREPNF NDGEKGGTDG KAEYPTELVA YLRNIRQLKE
      121 TEERVDEMVY DKCAEECAGV EDKLLSFRES CIVVEEVFGS TPHSAELFLS GLARIKHKRL
      181 LDLLFSGQSA HTIETLIYAL YPIKTHKPIE LIEKFNDLLC DNWTDATTCQ NSAFLIRCLA
      241 RVTCGLKRKE KNAQGDPVQL VQGQSAEIKA ELSRIFDRIA SLALEDAANP RVENVHVSLV
      301 VQDVLEADIT AKMGKSSALV DKILSSVTEN GLRQLWLGKN SSRVWEKLVM SCREETLQSL
      361 WDKVIVGHVS ELAMHACANF PLQKFIGSVK SLELATDVCD ETTPLIEKLL SADRWGVVEA
      421 LLRCAARHEE LQEPLLKQLR KFFKASKVDN KLNFLLNTLT LNKYNGKTFY VSDCHLHGSL
      481 LVEVLLSFNK VKTLSACLEA LQADEVMQLA KNRCGSHVLQ ATFSSKNIGD EVKEKLIKAF
      541 ENDWESLISD VYGSHVFETI WDRYDVRRRQ DLMKKLVPIR SDSKFWKFAM LRCDMYLFRK
      601 DRKAWVEKMK KSVKAVKH
//