LOCUS       WKY04498.1               562 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1323
PROTEIN_ID  WKY04498.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005476"
                     /note="NIPPO_CHRIV.G9316.T1"
     intron_pos      48:1 (1/14)
     intron_pos      81:0 (2/14)
     intron_pos      105:2 (3/14)
     intron_pos      143:0 (4/14)
     intron_pos      167:0 (5/14)
     intron_pos      206:2 (6/14)
     intron_pos      248:1 (7/14)
     intron_pos      275:0 (8/14)
     intron_pos      325:1 (9/14)
     intron_pos      352:0 (10/14)
     intron_pos      381:1 (11/14)
     intron_pos      431:0 (12/14)
     intron_pos      474:1 (13/14)
     intron_pos      520:0 (14/14)
BEGIN
        1 MTNTSILDIT TTTTLTISTR TSFYNATVAL RTSKGKAILD EMRSHIFGED EAIHDSDLIC
       61 NCNAALCDSE LVHLLGSAYK GKCRAKRGRC FKVYDEVHDF RMSVGCVDYE EIYPLPIFCL
      121 PHPKFHMTCC NYSFCDEDVI IKPEAMRVSR GNSIMWLSIL VAVVFSLVFI AAIAFLLLRN
      181 QKALLMARKY LRIGPRMTAA LNHISPREDE VPMIETMSQT TTTSAPAIQL LLLKGLESTD
      241 AGSGSGSGLP LLTQRNIARQ IELVREIGQG RFGDVWLGAW KGDLVAVKIF SSRDEGSWTH
      301 EVETFQIHML HHPNILQFYA SDRKDTGTAM QLWLITEYHS HGSLFDYLSV NTVSLITLVQ
      361 MIRGISNGLS YLHTELMGIQ KKPAIAHRDI KSKNILIKSD LTCVLADFGL AVRYESGHIS
      421 LPNSNKCGTV RYLPPEILDE NVESTRFEFY RTADMYAIGL VIWEIARRTT CQAGSASSFA
      481 ESLPYYDKVS RDPTIREMRE VVVTQGVRPY ESPHWKDNNV LRDVARVMRE CWSTNPDSRL
      541 TAMNVRICMD RLAQTEFNLR FS
//