LOCUS WKY04458.1 269 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-1283
PROTEIN_ID WKY04458.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005452"
/note="NIPPO_CHRIV.G9292.T1"
intron_pos 22:0 (1/7)
intron_pos 51:1 (2/7)
intron_pos 96:0 (3/7)
intron_pos 132:0 (4/7)
intron_pos 165:0 (5/7)
intron_pos 214:0 (6/7)
intron_pos 263:1 (7/7)
BEGIN
1 MRTRLLALVL LIAAASFVDA KKKKDLDELE SLLENIDEDQ DNADSTPTKK PALVKNPCED
61 HVCGWGKECV VGKKGDPHCE CISKCPELDG DPMDKVCANN NETFTSLCDL YRERCLCKKG
121 SKYCEKKSHA KVHLEYLGEC KQLSECTDDL MAQFPERMAD WLFQVMKELK RRRELHKLEW
181 EELIQEAEMD DEKRHVYPVI WKFCDLDIKP HDKAVSHHEL IPITAPVIPM ESCIKPFLEG
241 CDKDNDGTIS IHEWGHCLGL KDGEIQERC
//