LOCUS       WKY04449.1               548 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1274
PROTEIN_ID  WKY04449.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005446"
                     /note="NIPPO_CHRIV.G9286.T1"
     intron_pos      44:2 (1/13)
     intron_pos      100:1 (2/13)
     intron_pos      155:2 (3/13)
     intron_pos      190:0 (4/13)
     intron_pos      215:0 (5/13)
     intron_pos      255:2 (6/13)
     intron_pos      287:0 (7/13)
     intron_pos      336:1 (8/13)
     intron_pos      371:0 (9/13)
     intron_pos      392:0 (10/13)
     intron_pos      417:0 (11/13)
     intron_pos      461:0 (12/13)
     intron_pos      512:2 (13/13)
BEGIN
        1 MLAPTDHDGQ AIFRTVKEEP ATVIAAPLES TSELEATMPT SRSGTPMGYS ELANVLRGAR
       61 RVDEPLATTV VPRGPPVPAV RTEFPVKVCP TTYASSILRG NSWTVQASGS QQTHAQYVQS
      121 KIRAASNASL AVLPPGAAAK TGTQYGITAS ISRPSSHRAH VEKRWVDEDI THYGAIEENC
      181 DNLDEWLDKV DVSKFKQDIS VDLMSRPKLI KKERHQPVIS PYPKPGWSYS NLIALALKNS
      241 DTGQLTVAEI YSFMLEHFPY FRTAPNGWKN SVRHNLSLNK CFRKVEVDDD IPALHQTRKS
      301 CLWMINPERL DKVEQDIRKW RERNPSSVTE GMARPEDLQA IEEGTKGLPT RSSKQVLRAV
      361 HIDNKRFRGE PIYTTHGSEH HFISEDAVAA EDLFHIVKHE DRLISSEMDN AVVSQNLYIP
      421 SVCRESVEYR PSSVHRHDDF MQTTFPPTET LILNNSGRAK RSRLDESPSP SRDIPPVMEI
      481 LPPAFLDAFI PSLGTPVKAK KSHREASLSP IRTESGFRHA HDALNDNSLL AAALEQSPYK
      541 MSVTFPVL
//