LOCUS       WKY04436.1              1022 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1261
PROTEIN_ID  WKY04436.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005438"
                     /note="NIPPO_CHRIV.G9278.T3"
     intron_pos      55:0 (1/24)
     intron_pos      103:2 (2/24)
     intron_pos      140:1 (3/24)
     intron_pos      169:0 (4/24)
     intron_pos      188:0 (5/24)
     intron_pos      218:0 (6/24)
     intron_pos      247:1 (7/24)
     intron_pos      262:2 (8/24)
     intron_pos      306:0 (9/24)
     intron_pos      340:1 (10/24)
     intron_pos      394:0 (11/24)
     intron_pos      423:0 (12/24)
     intron_pos      480:0 (13/24)
     intron_pos      519:1 (14/24)
     intron_pos      565:0 (15/24)
     intron_pos      610:0 (16/24)
     intron_pos      645:2 (17/24)
     intron_pos      677:0 (18/24)
     intron_pos      716:0 (19/24)
     intron_pos      748:2 (20/24)
     intron_pos      788:0 (21/24)
     intron_pos      849:1 (22/24)
     intron_pos      929:0 (23/24)
     intron_pos      987:0 (24/24)
BEGIN
        1 MPLRLDVKRK LLARSDRVKC VDLHPTEPWL LAALYNGNVH IWNYENQQLV KSFEVCDLPV
       61 RAAKFVPRKS WVVTGSDDMH VRVFNYNTLE RVHQFEAHSD YLRSIVVHPT QSFVITASDD
      121 MMIKLWDWDN KWQMKQSFEG HTHYVMQVAI NPKDNNTFAT ASLDKTVKVW QFGSQQPNFT
      181 LEGHEKGVNC VDYYHGGDKP YLISGADDHL VKIWDYQNKT CVQTLDGHAQ NVSSVCFHPE
      241 LPLIITGSED STVRLWHAST YRLETTLNYG LERVWCIQAQ RGSNTVAIGY DEGSVTLKLG
      301 REEPAVSMDQ SGKILWARHS EIQQANLKTL DAEASEAIQD GERLPLSVKD LGACEIYPQT
      361 LAHSSNGRFV VACGDGEYIV YTAMALRNKD FGQALEFVWA TDPNMFAVRE SATSVKIKKN
      421 FKDFKQLRTD AVMEGIDGGP LLAARSATGL CFYDWETAQL VRRIEIAAKH VYWSDSGEMV
      481 AICGEDSFYV LKYNADVFAS ASAEDITDDG VEDTFEVVGE QAEGVKTAFW IGDCFVFTTT
      541 LNRLNYYVGG EIVTIAHMDR PLYLLGYMAK ESRVYAVDKE LNVVSYKLLL CVLEYQTAVM
      601 RRDFETADKV LTTIPKEQRT RVAHFLEKQG FKRQALAVSQ DPDHKFDLAL ALGDLKTAYD
      661 LAMQGDSEEK WKLLSQAATL KSELMLAGEC LGRARDYGGL LLLATCAGSA PLLNKLAADS
      721 ATNGHHNVHF TTSLLLGDVD ACLEALIATD RIPEAAFFAR THCPSQLPRI MNLWKEKADR
      781 VQKNTTRKIG ESLADPVRYE NLFPEWATSQ RAESYLRELA KLSVPASVRA PTNQNRNVME
      841 ELETALSTGA VTFDDNGQAH LRGVARKPAP VPNSIPNSIP HPTPTAPAPA PVPVVVPEPR
      901 KRTPSPPPRE PTPPRREPSP EPEHAAAQLS DDDSDGLSRE AVSVTTAAAH AEPDVVSERP
      961 RPDVVPRHGG PDLLPSPSGQ RAPQPEVVVD AGEVRWSDDD FGDAEDGGND INLDDLNLDD
     1021 ED
//