LOCUS       WKY04236.1               852 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1061
PROTEIN_ID  WKY04236.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005312"
                     /note="NIPPO_CHRIV.G9152.T1"
     intron_pos      23:1 (1/20)
     intron_pos      66:0 (2/20)
     intron_pos      103:0 (3/20)
     intron_pos      142:0 (4/20)
     intron_pos      170:0 (5/20)
     intron_pos      207:1 (6/20)
     intron_pos      246:1 (7/20)
     intron_pos      291:2 (8/20)
     intron_pos      335:0 (9/20)
     intron_pos      395:0 (10/20)
     intron_pos      431:0 (11/20)
     intron_pos      484:1 (12/20)
     intron_pos      536:2 (13/20)
     intron_pos      571:2 (14/20)
     intron_pos      607:0 (15/20)
     intron_pos      626:0 (16/20)
     intron_pos      678:2 (17/20)
     intron_pos      708:0 (18/20)
     intron_pos      743:0 (19/20)
     intron_pos      797:0 (20/20)
BEGIN
        1 MSTHQRDGSL IRKKQDQWAR ERAEEAENTW FPFGSPGGGN PNRKYESINY SSPLSKSQTQ
       61 VEVGQETAAN FEKESTLKSQ SQQTQQTHHV KMMTEVSNQC HTQTGLMREH TTIHPGSLPP
      121 TAYQIPFQCS YPMPQGYPSA GGPQPVQWSY MQPIPISFVP PGTIPIPVQD LSKSIADGTP
      181 ICPVTVAEQF AQMNLQNAQW RTMAPSVPVA IPIPPPAAYH GAPVDPRQDP HEPNVAVVPP
      241 MESHEDFDSS PGCSGSNSRR GTVGEPPCES ERQRSASSAT DFGAQVAERK RLEEQDAERD
      301 RHEEEKAMRE KEEKARREAD AERMRKEEER LKEQEKERVR RALEEALERA KHEAEITRKA
      361 RVFKHVLEGA EKSPELERRL LGVDPETGDR ILNEISQMER QKKLEREVIV KSSPKKGDQR
      421 DKSPSDRRSR SIQPKSRSSS VSGAAFITPE ARGKSPSGSR PIASGRPSES ADERVVKSAQ
      481 ERTGVRHPPC PASGSTPLRR SIPGRMSVRV TRKEKENTAT DGSADGPTRS TGRTMMKSSH
      541 APIGSVGQDH RMPPSKIPIA TPTSTAARAR SGSRPPPLPQ QQPLRSANHF PAVESEALQL
      601 IKNIPVEPAR PRTLGNLVSP EDFCDNPLYS PVATRNRRSY KMRGLTDSPV NMVDSAGSSR
      661 GSTEENSSSG SASPQAAAQS PVPSIVISHD TFNGTKSILT SNNNELKIRS ALSSPAAYLN
      721 QTPRSSTYVK KLVEKGCNKH GEDALSPNLR RKAEANISRS PSVQSLRGSM GNLAGWRGSV
      781 SNLVEDPATL SRFRSLNPNY RSFNVKKNTE KQQEVIDRLS KLRENLRSRE NFVERGVLPK
      841 HQMSAPQAAV KI
//