LOCUS       WKY04235.1               540 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1059
PROTEIN_ID  WKY04235.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005311"
                     /note="NIPPO_CHRIV.G9151.T1"
     intron_pos      6:2 (1/16)
     intron_pos      17:0 (2/16)
     intron_pos      63:0 (3/16)
     intron_pos      99:2 (4/16)
     intron_pos      158:0 (5/16)
     intron_pos      199:1 (6/16)
     intron_pos      230:0 (7/16)
     intron_pos      270:2 (8/16)
     intron_pos      302:0 (9/16)
     intron_pos      334:0 (10/16)
     intron_pos      364:0 (11/16)
     intron_pos      387:0 (12/16)
     intron_pos      421:0 (13/16)
     intron_pos      469:2 (14/16)
     intron_pos      487:2 (15/16)
     intron_pos      516:0 (16/16)
BEGIN
        1 MISVTSHSIA STGCSVMIPQ GSLGIRSVCP TAQRCLHASV SAFGGVPSQI TQPSDGTTTP
       61 NYTTAAKQVL GLNSATENSG PAKAVVTQTA ANGAPTKAQF LKHTFEKRAS RTEVTSRTKA
      121 LVKKLLLSES PSSKLLRIQE LSSHIIRFPP TRIIAAQHPR LIAELLSTVT SSEATGELRA
      181 EARQCLTLCG CQPAVKSRGV NLLSIDGGGT RGMMGLEVLE QLERVSGKKI CDLFDHVIGV
      241 STGSIIACLL VAKGYDVKEC REVYMDVSKK LFSQNRLTGV SGVVLNHSYY DTKKWVKILK
      301 EIIGDDLTTI ETSKACVPRL SIVASIVNSP VLQPYIFRNY EPPAGRDSHY RGSTGHYLWQ
      361 AIQASAAAPL YFEEVKLDNF VLQDGGVIAN NPTAIGIHEA KLLWPEERLH CVVSVGNGRS
      421 VCDLEQEESL NPSALSSLQK FNRIVDSATD TEAVHMCMHD LLDQNVYFRL NPYMSSPYGL
      481 DEIDPKKLEQ MQNDAKLYVR RNILKIEDAA ARLLQKPTVL QRNVRRFEQW MDEKGMYSPR
//