LOCUS       WKY04207.1               936 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-1031
PROTEIN_ID  WKY04207.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005299"
                     /note="NIPPO_CHRIV.G9139.T2"
     intron_pos      45:1 (1/22)
     intron_pos      93:0 (2/22)
     intron_pos      157:2 (3/22)
     intron_pos      201:0 (4/22)
     intron_pos      223:0 (5/22)
     intron_pos      271:1 (6/22)
     intron_pos      299:0 (7/22)
     intron_pos      345:2 (8/22)
     intron_pos      380:2 (9/22)
     intron_pos      424:0 (10/22)
     intron_pos      467:0 (11/22)
     intron_pos      488:0 (12/22)
     intron_pos      517:2 (13/22)
     intron_pos      561:0 (14/22)
     intron_pos      597:0 (15/22)
     intron_pos      643:0 (16/22)
     intron_pos      662:2 (17/22)
     intron_pos      700:2 (18/22)
     intron_pos      763:0 (19/22)
     intron_pos      801:2 (20/22)
     intron_pos      837:2 (21/22)
     intron_pos      912:0 (22/22)
BEGIN
        1 MPAVKGDGMR GLAVFISDIR NCKSKEAEMK RINKELANIR SKFKGDKTLD GYQKKKYVCK
       61 LLFIFLLGND IDFGHMEAVN LLSSNKYTEK QIGYLFISVL IEQNSDLMKL IVQAIRNDLT
      121 SRNPIHVNLA LQCISNIGSR DMAEAFSNDL PKLLVSGDTI DFVKQSAALC LLKLFRTAPD
      181 IIQPGEYASR IVHLLNDSHM GVVTSAASLI ESLSKKWPDE YKGCVPLAIS RLSRIVTATY
      241 TDLQDYTYYF VPAPWLCVKL LRLLQNYPPP EDPSNKARLL ECLEGVLNKA QDAPKSKKVQ
      301 HSNAKNAVLF EAIALIIHMD SEANLLVRAC NQLGTFLAHR ETNLRYLALE SMCLLATSEF
      361 SHETVKKHQE TIINSLKTER DVSVRQRAVD LLYAMCDRTN ASEIVSEMLS YLETADYSIR
      421 EEMVLKVAIL AEKYATDYTW YVDVILKLIR IAGDYVSEEV WYRVIQIVVN REDVQGYAAK
      481 TVFEALQRPA CHENMVKVGG YILGEFGNLI AGDQRSSPQI QFELLHSKFP LCSIATRCLL
      541 LTTYVKFCNL FPEIKHIIQQ VYQIDHNLRN PDAELQQRAV EYLQMSKVAT PDVLATILEE
      601 MPPFAEKESS LLAKLKKSKP QVEELENVEK EKKNRPNATM VKDGAATSSL VDFSQPGTEG
      661 SGSLVDIFGH PSSGQTDQIS PKTGNMGEEV EIANKHDYLK FVLKNNGVLY EDDVIQIGCK
      721 LEARTNLARL GMFYGNKTTN PFTDFMPIVS CPGALGVQLQ AQAKPIDSVV QAGTQVQQLI
      781 NFVCVQEFGR MPIIQIKFSH INRAGQTQLF DKSVYLPVFI NKFFEPTEMA SEQFFTRWKA
      841 LGQPSQECQK IFPAKAPMDP ALVTQKLVGL GAKLLTDVDP NPDNYVCAGI IHTQTQQIGT
      901 LIRLEPNKQA KMYRLTVRSS KDTVSSYLVD VLVEQF
//