LOCUS       WKY04165.1              1366 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-994
PROTEIN_ID  WKY04165.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005278"
                     /note="NIPPO_CHRIV.G9118.T3"
     intron_pos      41:0 (1/33)
     intron_pos      74:0 (2/33)
     intron_pos      107:0 (3/33)
     intron_pos      132:0 (4/33)
     intron_pos      168:0 (5/33)
     intron_pos      207:0 (6/33)
     intron_pos      240:0 (7/33)
     intron_pos      272:2 (8/33)
     intron_pos      306:0 (9/33)
     intron_pos      339:0 (10/33)
     intron_pos      394:1 (11/33)
     intron_pos      454:1 (12/33)
     intron_pos      500:2 (13/33)
     intron_pos      552:1 (14/33)
     intron_pos      605:2 (15/33)
     intron_pos      654:1 (16/33)
     intron_pos      700:2 (17/33)
     intron_pos      759:0 (18/33)
     intron_pos      792:0 (19/33)
     intron_pos      838:1 (20/33)
     intron_pos      871:0 (21/33)
     intron_pos      905:0 (22/33)
     intron_pos      943:1 (23/33)
     intron_pos      992:0 (24/33)
     intron_pos      1018:0 (25/33)
     intron_pos      1056:1 (26/33)
     intron_pos      1085:0 (27/33)
     intron_pos      1149:0 (28/33)
     intron_pos      1179:0 (29/33)
     intron_pos      1220:2 (30/33)
     intron_pos      1246:1 (31/33)
     intron_pos      1307:2 (32/33)
     intron_pos      1324:0 (33/33)
BEGIN
        1 MVQAGGNRRP WAEAASSAFA IASALPVTMN STQIADLFDK AGETLLIVAA RANNVAAVKT
       61 LALDAEIVDE TDNEEWSALL NAAHKGHTEV VRILLENGAA VDQPDFLGWT PLMWAVYKCH
      121 PDVVDLLLNY GAHVNLIDEE DGLTPLIVAS GRGFTTVVEK LLAADAQVNA CDKFGSTALI
      181 WAARKGHLPI VQMLLNAGAE VDAIGMGSST ALMLATKGNY LSVVDLILTR EPNANVVDQN
      241 GLSALGIAAR EGYADICESL INSGAFVNQC DKYGNWILIS AVRSGNANIV RLLLEKFADV
      301 NARDSENRTA LHLAIDKSFM DIVYIILERK PNLELKNKDG ETPLLRAVKS RHVALCDLLV
      361 KAGAKISAAD NNGDNALHLA LRARSRRLTQ TLLANPSDSR LLYRPNRLGQ TPYSIDQGNP
      421 QPILPLIFGP IDAEQQMDTM LGYDVYSNVL ADIVCEPSLS LPLTVGLYAK WGSGKSVLLA
      481 KLKDSMYSFS RNWLEGAHLS MSALIFFYIT LFCVIVTMTF TTIFALFTSL AALIAVWIIG
      541 ACILVVLISS YCFIYYGSEI RGWSAPSRIA NSLSHFIYRV RLVWNVATLY APMHSENDIA
      601 SNPVGFLFAD YHRLSSIGGE QALAKIVATL FESAETHFGV LPVRLFCSLK TAHPGQHGAL
      661 RKHCGVPIVL LVGMAIIMLL CSEVFMTLWL FSERDASSGA LFVASIAFAI VFLMITIFPI
      721 IILVRYGYTN VPRRRVNAAA RSVHKLRFEG LMQKLQTEVD LLADMIRSLD AFTRSQTRLV
      781 VVVDGLDNCE QERMVQTLDA LELLFSARKH RPFITIIAVD PHIIVSAINH NMHSALTGTE
      841 LTGHDYLKNI VNMPLYLHNS ALRQLQNKLK DKRESFADWK ERYRRQDTFH GSHLSLADGR
      901 QSRKATIVVG TRSIGESLLN DDYFSNMNPR AMRRIVNALT LTGRLMRAFE IDFSWLALGH
      961 WVSLLEQWPS RMCWLIDRAL DINNNGLTLA EVYHQLKDHI PKKDSLIELD RNPDNFETFL
     1021 DSPAIPSSEQ LTVGHVKKFV PCTSNLDPYL RKLIRERRQG LEDPVQELGL GSVTIPPNAR
     1081 YLFGDEKVWS TVNTPLVEMK LDAVCALVKR LDITASRIEA ITKKFQQLNL CGLVLASCPL
     1141 QDLKDALGIP LGDWTMVRLL VETLKAFGTN VPGLKIDKRK ALTLAEEDEE ASDVEIEVNR
     1201 RDTIIRSPTP VQMSCEQRRR SMVMSATDMN SDHKWLMESL SGMDLTQTEG DLDLAPSSGG
     1261 ASVRFGDALE DGLASDADST ESRFGSRENL LDPGPILSRH SSTSNGRGEL MRQIHNDSIH
     1321 SAADISGLSI TSDDDHQMTV MRRDGSILAN ERTQLANLFG RENGNA
//