LOCUS       WKY04110.1               858 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-935
PROTEIN_ID  WKY04110.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005238"
                     /note="NIPPO_CHRIV.G9078.T2"
     intron_pos      39:0 (1/20)
     intron_pos      77:1 (2/20)
     intron_pos      105:2 (3/20)
     intron_pos      135:2 (4/20)
     intron_pos      193:0 (5/20)
     intron_pos      214:2 (6/20)
     intron_pos      279:2 (7/20)
     intron_pos      326:0 (8/20)
     intron_pos      354:2 (9/20)
     intron_pos      406:2 (10/20)
     intron_pos      429:2 (11/20)
     intron_pos      464:0 (12/20)
     intron_pos      530:1 (13/20)
     intron_pos      559:1 (14/20)
     intron_pos      607:0 (15/20)
     intron_pos      638:2 (16/20)
     intron_pos      682:2 (17/20)
     intron_pos      744:0 (18/20)
     intron_pos      784:2 (19/20)
     intron_pos      807:1 (20/20)
BEGIN
        1 MDGGSFRLNP KYVKADKESW KFHTYVKPGE ENARERKENV PVVEAKSNTD IDVLFIIFII
       61 SLIATVQAVL AVGSYSGEGK PPMFGDFEAQ RHWMEITLHL PVRQWYVNGT DNDLLYWGLD
      121 YPPLTAYHSY IMGVVAHYIN PSWVALKSSR GIQDAVHKFF MRATAILPFY FIYAPALIYF
      181 FLSIPKSKEI SKNTLLALSL LYPGLLAIDN GHFQYNSVSL GLFLFAFSFL MNGRFYLGSI
      241 SFVLALNYKQ MELYHALPIF VFILARCLKR PIWSNLLSSF TSLVKVAVIV LGTSAVIWMP
      301 FLMKGTQSTL AVIERIFPFS RGLYEDKVAS VWCAFSFILR LNRYFSLPAQ VKISALCVLL
      361 LVLPSLSFLF LRPTVRNFKL SLLITSLVFF LFSFQVHEKS ILLVAVPALL LMSEYPVASV
      421 WLLHITNTSM FSLYLKDGIP FVLALVVAYY ILCSIAVKFQ GRLVLFVYHL SCLSALLICL
      481 AECTLTPPKR YPHIFPLFNA IFSCCHFLIF VAFFYLEMIR VEYELLLRKV QKCFRMPESV
      541 LDQLKKVTVV VADTGDFNAM AEFKPTDATT NPSLILGASK MPKYESLMKD AVAYAKQHAA
      601 GKTSEEILEL AMDRLFVVFG KEILNIVPGR VSTEVDARLS FDTEKSVEKA LHLIEMYNQL
      661 GISKERILIK LASTWEGIKA AKILESIHGI HCNMTLLFNF EQAVACAEAN VTLISPFVGR
      721 IMDWYVKNTD TKKYTRQDDP GVKSVTRIYN YYKKHGHKTQ VMAASFRNTE EIKGLVGCDL
      781 LTISPGLLKQ LSEDQEAVPT VLKKENAADM DIPKIKICEK TFRWAMNEDA MATEKLAEGI
      841 RNFAKDARTL EGIVKKML
//