LOCUS       WKY04082.1              1543 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-907
PROTEIN_ID  WKY04082.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005222"
                     /note="NIPPO_CHRIV.G9062.T3"
     intron_pos      8:2 (1/32)
     intron_pos      43:0 (2/32)
     intron_pos      92:2 (3/32)
     intron_pos      162:1 (4/32)
     intron_pos      205:0 (5/32)
     intron_pos      242:2 (6/32)
     intron_pos      270:0 (7/32)
     intron_pos      332:1 (8/32)
     intron_pos      385:0 (9/32)
     intron_pos      410:2 (10/32)
     intron_pos      454:0 (11/32)
     intron_pos      491:0 (12/32)
     intron_pos      517:0 (13/32)
     intron_pos      566:0 (14/32)
     intron_pos      617:0 (15/32)
     intron_pos      656:0 (16/32)
     intron_pos      687:0 (17/32)
     intron_pos      710:0 (18/32)
     intron_pos      749:0 (19/32)
     intron_pos      815:0 (20/32)
     intron_pos      876:0 (21/32)
     intron_pos      950:0 (22/32)
     intron_pos      1007:0 (23/32)
     intron_pos      1084:0 (24/32)
     intron_pos      1121:0 (25/32)
     intron_pos      1150:1 (26/32)
     intron_pos      1193:0 (27/32)
     intron_pos      1225:0 (28/32)
     intron_pos      1261:0 (29/32)
     intron_pos      1387:0 (30/32)
     intron_pos      1403:2 (31/32)
     intron_pos      1481:0 (32/32)
BEGIN
        1 MPIDFHQRIG TNWLSGEERS RLEAVQRDWR LSRPYNANST NRPWIRARHR EQPTQDVSST
       61 TPKPNEGSAL VAAPNNAIVP VTTQTSIFDR ARNASKPVTP NAAVIAPPVN EKLTSDIKTA
      121 VTPTISDEKE KERRDEEVRA KEQLEVDDDF DAQEKPIDKS PNGRFLKFDE ELGRGSFKTV
      181 YRGLDTETGV AVAWCELQES KLNRAERQRF REEAEMLKDL QHPNIVRFYD YWERTDPSGK
      241 RKYIVLVTEL MTSGTLKMYL KRFKRINIKV LKSWCRQILK GLSFLHSRNP PVIHRDLKCD
      301 NIFITGTTGS VKIGDLGLAT LKNKSYAKSV IGTPEFMAPE MYEEMYDESV DVYAFGMCLL
      361 EMVTGEYPYT ECQFPAQIYR KVTTGVKPEC FNRIPQQYPE IREIIDRCIR VRREERSTVK
      421 QLLADDFFTP EELIGIRVEI KNRDLDLAEL NVEIQMQLRV YDEKKRKQYR FRENEGLQFT
      481 FDIENDTAEE VVQQMIEQQH IPDEDTKMIT KLIKDKVESF KRDREFRIAE LKRQREEEER
      541 QREEQAIKEE MKARAKEKER LEAEQQEARN CEAPPQPAAQ QPVVSPPVTS SNLATVHQTT
      601 VTAASGDKAT QNVMTAPAGE DVPETQTMTS HEEKKKAKRK IVLEVLKVDD AKDQPLVSCK
      661 LDTAHKTVTF QFAPDSDKPS VIAEKLLSEN CLAQHHVAFV EDQLEQIIQL VNSGVSRVVG
      721 TKLTTVVETQ TTTTTSTHNI AVAPPPARTG ASPAPAAASA TPATSVPPVP KVAAPAQPTV
      781 TTTAPVAEPH VQAATTSSEA APTTTPSTSK TETKPNLQAA SAMSRSVDGD GTSSSATPIP
      841 PSVPQSSSVH AISTASSTST LVAAPVVAAK PSRFQVTPSA VTSVSPAPVP STALSSVETT
      901 TLPPVSQAQT QQLSPPVPTM LSNGSSPSTT AHSNTSSVTS NTSSGSRFKV QAVPVQATLA
      961 PTSSAESGFS SSTSTHTEAS MSSMGSSSTP LAVQPPVTTN VAASMTMPVP LVSPATISIP
     1021 TAPVVTSATS VQATNEVSAA GSSIPAPSIS VAHATSTTSL CHPAQVTHLD LSALQKLDSE
     1081 LRKVSGVSTV SAGCQSVHAP IPDVMSQSAA SLVLTNTNAP VHNAHPALHP TTSLPHTPAH
     1141 SGEVATNLSG LSEKLAVLSQ IQQQQKDDQQ THQTQPSQPA QPTSHQLAPA HKDDEEHASN
     1201 QTTASGQDEL HVDTLNGLAQ ALQKVINPEQ REATPLSVND TVGRATPPHP LANSTQELYY
     1261 LTTACSLPSA SVAATSEDES LSPDRKISDT TPACATAVGQ LLPSSTAPEL MQRLRTMDSL
     1321 ATFKNLESAL SCTLGTSSMR PSVVRDDAAS HRDDVSSVCG SSAVFHVGTP PIFSPVPTSE
     1381 SDFECQAEDE DDDDPEILAL IRRHRMQQLH LREQQRLELE ELRARQRQLR MVRASTAAPE
     1441 GSCGDPMSHS YQNTHHVHNR HQASAVSLPA SPPPVSNANE RPSPRRLDCS TLAAQLLAIH
     1501 GSTSSSSTPP SGSSTTTGGG SSQTNFEGPN RMRDNYSAPP PQS
//