LOCUS       WKY04058.1               661 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-884
PROTEIN_ID  WKY04058.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005211"
                     /note="NIPPO_CHRIV.G9051.T1"
     intron_pos      22:2 (1/14)
     intron_pos      84:0 (2/14)
     intron_pos      155:0 (3/14)
     intron_pos      209:0 (4/14)
     intron_pos      250:2 (5/14)
     intron_pos      289:0 (6/14)
     intron_pos      339:0 (7/14)
     intron_pos      386:0 (8/14)
     intron_pos      414:0 (9/14)
     intron_pos      450:1 (10/14)
     intron_pos      501:0 (11/14)
     intron_pos      537:0 (12/14)
     intron_pos      582:2 (13/14)
     intron_pos      616:0 (14/14)
BEGIN
        1 MAGGYEKPKL FIGRIMSFPE CRNSDTNTIV RTSTETSSQV EYHHHHYTTA TEQPRTSSST
       61 LLDHPPPAVA TIVAPEEAEP TEQAPPLRRN GTGGQSWPVK THEHVNISPP KFRMPDIESF
      121 VHNGNLPHPE KIVGEENAVL RDWNPRALVR ALYEVSYEPR VETKRNRFVS MEGHVEVPSD
      181 ETATVAELER CWKQLYMRTK EGRLQIFVSH CADEAPAEEV VLSGVDVDAN REERTLTIHG
      241 GRDHIRMTLR VQSNVFDKWR HSLLSHAASS QIDAYVKPIP KTFQHLTERV VVIELGSCSI
      301 RGGVLTTEPS LPQSFFPAIA VRTDDGRIIV GEEAYAPEIR HHGEFVRPIQ ALDPNVERYT
      361 MDREVVKECI KKVIQDIKVK PSQYKVLLSI PQNIPVALIG ELLTLILKDI GFQGAAITRQ
      421 PSLILYAYDV TTGVVVDIGD RLNIVPVIDG YVVESAICSI PYGATQVREA LRTTLCSNNK
      481 GLYSFQSPIE KLILRYVLEQ TSYVPEDYTQ EEKTSKEVNI SLDRFDPIPG MPTKFNIDNS
      541 RFLCTEGLFR PKKWGLDTKG LHHLIHDAVQ MSPIDSRRTL YRNIYLAGGA SLMPGLAEKL
      601 EQELAAIVPN SIHTQVHISP WRYNAAYLGA QIVASASTFS DSCVSLENLP TFLAHLQSSC
      661 F
//