LOCUS WKY04016.1 292 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-840
PROTEIN_ID WKY04016.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005192"
/note="NIPPO_CHRIV.G9032.T1"
intron_pos 37:0 (1/6)
intron_pos 83:0 (2/6)
intron_pos 112:0 (3/6)
intron_pos 162:0 (4/6)
intron_pos 216:0 (5/6)
intron_pos 260:0 (6/6)
BEGIN
1 METRAEKVEI KVRLLNCDEM KKLRKLLWSH SSDESESEMV YPGSVFITGA NRGIGLGLVR
61 EFLKVPVVEK VFAGCRNPDA AKDLNAIDDA RLKIVKVDVE SDKSINDAYS QVEASVGDNG
121 LNLLLNNAAI LPPYFTNGSI SRETLLKCMN VNVVGTAIIS QTFLPLLRKA SSNTSDDHWG
181 VDRAAIVNIS SFWASIRCNE DGSGELGSLA YKISKAALNQ LGKTMSIDLE DDKILIAQFC
241 PGWVQTEMGN MGGRTADITV EESASALVKS ISNLKKENNG GYYTRYLKPI PY
//