LOCUS       WKY03992.1               823 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-816
PROTEIN_ID  WKY03992.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005180"
                     /note="NIPPO_CHRIV.G9020.T6"
     intron_pos      18:1 (1/21)
     intron_pos      56:2 (2/21)
     intron_pos      98:0 (3/21)
     intron_pos      109:0 (4/21)
     intron_pos      160:1 (5/21)
     intron_pos      190:2 (6/21)
     intron_pos      214:1 (7/21)
     intron_pos      261:1 (8/21)
     intron_pos      286:2 (9/21)
     intron_pos      323:1 (10/21)
     intron_pos      370:1 (11/21)
     intron_pos      406:0 (12/21)
     intron_pos      455:1 (13/21)
     intron_pos      488:1 (14/21)
     intron_pos      507:1 (15/21)
     intron_pos      541:1 (16/21)
     intron_pos      583:2 (17/21)
     intron_pos      655:1 (18/21)
     intron_pos      697:2 (19/21)
     intron_pos      743:0 (20/21)
     intron_pos      777:1 (21/21)
BEGIN
        1 MPDTNVVVPV LLWSVFLFVV NAGELSRCCS GGARHFIQTQ TCSNLRSEGS TARCVRTAGI
       61 CCLRALLDSA CEEGTALAKQ DDMCPSTVNV LGGGLRKKRE SEYDRISSEC CDCCLLAKDL
      121 LLKNQPCVAP TGFSAACLKS FSRCCRDSYE VMESVPRSTG RPNITVFDSN TLYSGDRCAH
      181 AKCEHLCHDR GGESVECSCR SGYDLGPDGH SCVDVDECLL LVDDCLESQR CLNLPGSFKC
      241 IRTLSCGTGY AMDSDTEDCI DVDECNLGAH DCGPLYQCRN TQGSYRCDPK KCAEGELQNP
      301 QTGECTSIDC PQGYYPSNGM CNDVDECATG NRCGPGEECV NTAGSFRCQQ KGNICTAGYA
      361 VNENTGFCDD INECLNKTIC DGLMCINLPG SYKCRCNAGY EFNEKTKRCE DVDECEKFAG
      421 HVCDLSAECQ NTIGSFVCLC KDGFELAADK RRCEDINECE TGAARCEQKC INIPGSYQCI
      481 CDRGYTVGAD GRTCVDIDEC AMWAGSGNDL CMGGCINTMG SYICQCPQGY KIQPDGRTCV
      541 DVDECALGEC QGHERICVNT LGHYKCHNIE CPPNYVHDSN YKNRCNRPRS LCAGIPDSVC
      601 KSRYPVHITW QYIAIPKGIA ITSHRPTITL FTIKGPAHND SIVQFELNLK KAIPEEPSVL
      661 LAIRPNFLLQ KGKDHNSAVI AVRDTLDGPQ TIEMELTNVQ DGYSCLKVCK QEDAVCLGNH
      721 TKEILYQFRA LPSTSFVKHP IMVSRIRTHM ETPFSVSYYL DTVGKRHFII EQDRNIGIVK
      781 LAKPIIGPAV ERIRVNIHTK SRTGVILAYN VAIIEVHVSQ FFF
//