LOCUS       WKY03989.1               843 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-813
PROTEIN_ID  WKY03989.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005180"
                     /note="NIPPO_CHRIV.G9020.T3"
     intron_pos      18:1 (1/20)
     intron_pos      56:2 (2/20)
     intron_pos      98:0 (3/20)
     intron_pos      149:1 (4/20)
     intron_pos      173:2 (5/20)
     intron_pos      197:1 (6/20)
     intron_pos      288:1 (7/20)
     intron_pos      313:2 (8/20)
     intron_pos      350:1 (9/20)
     intron_pos      397:1 (10/20)
     intron_pos      433:0 (11/20)
     intron_pos      467:1 (12/20)
     intron_pos      500:1 (13/20)
     intron_pos      519:1 (14/20)
     intron_pos      553:1 (15/20)
     intron_pos      595:2 (16/20)
     intron_pos      667:1 (17/20)
     intron_pos      717:2 (18/20)
     intron_pos      763:0 (19/20)
     intron_pos      797:1 (20/20)
BEGIN
        1 MPDTNVVVPV LLWSVFLFVV NAGELSRCCS GGARHFIQTQ TCSNLRSEGS TARCVRTAGI
       61 CCLRALLDSA CEEGTALAKQ DDMCPSTVNV LGGGLRKECC DCCLLAKDLL LKNQPCVAPT
      121 GFSAACLKSF SRCCRDSYEV MESVPRSTVF DSNTLYSGDR CAHAKCEHLC HDRGGESVEC
      181 SCRSGYDLGP DGHSCVDRNE CRSLNPPCEW GREVCVNVIG SYMCQPLRPG PNDKNRPRFV
      241 GMRDQSRLAA FRRSESFVTV VNGTATTPEP FVLRCPPGWT ARGDQCVDVD ECNLGAHDCG
      301 PLYQCRNTQG SYRCDPKKCA EGELQNPQTG ECTSIDCPQG YYPSNGMCND VDECATGNRC
      361 GPGEECVNTA GSFRCQQKGN ICTAGYAVNE NTGFCDDINE CLNKTICDGL MCINLPGSYK
      421 CRCNAGYEFN EKTKRCEDVD ECEKFAGHVC DLSAECQNTI GSFVCLYINE CETGAARCEQ
      481 KCINIPGSYQ CICDRGYTVG ADGRTCVDID ECAMWAGSGN DLCMGGCINT MGSYICQCPQ
      541 GYKIQPDGRT CVDVDECALG ECQGHERICV NTLGHYKCHN IECPPNYVHD SNYKNRCNRP
      601 RSLCAGIPDS VCKSRYPVHI TWQYIAIPKG IAITSHRPTI TLFTIKGPAH NDSIVQFELN
      661 LKKAIPEEPS VLLAIRPNFL LQKGKDHNSA VIAVRDTLDG PQTIEMELTL RLTKKGVNVQ
      721 DGYSCLKVCK QEDAVCLGNH TKEILYQFRA LPSTSFVKHP IMVSRIRTHM ETPFSVSYYL
      781 DTVGKRHFII EQDRNIGIVK LAKPIIGPAV ERIRVNIHTK SRTGVILAYN VAIIEVHVSQ
      841 FFF
//