LOCUS       WKY03988.1               849 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-814
PROTEIN_ID  WKY03988.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005180"
                     /note="NIPPO_CHRIV.G9020.T2"
     intron_pos      18:1 (1/20)
     intron_pos      56:2 (2/20)
     intron_pos      98:0 (3/20)
     intron_pos      149:1 (4/20)
     intron_pos      179:2 (5/20)
     intron_pos      203:1 (6/20)
     intron_pos      294:1 (7/20)
     intron_pos      319:2 (8/20)
     intron_pos      356:1 (9/20)
     intron_pos      403:1 (10/20)
     intron_pos      439:0 (11/20)
     intron_pos      473:1 (12/20)
     intron_pos      506:1 (13/20)
     intron_pos      525:1 (14/20)
     intron_pos      559:1 (15/20)
     intron_pos      601:2 (16/20)
     intron_pos      673:1 (17/20)
     intron_pos      723:2 (18/20)
     intron_pos      769:0 (19/20)
     intron_pos      803:1 (20/20)
BEGIN
        1 MPDTNVVVPV LLWSVFLFVV NAGELSRCCS GGARHFIQTQ TCSNLRSEGS TARCVRTAGI
       61 CCLRALLDSA CEEGTALAKQ DDMCPSTVNV LGGGLRKECC DCCLLAKDLL LKNQPCVAPT
      121 GFSAACLKSF SRCCRDSYEV MESVPRSTGR PNITVFDSNT LYSGDRCAHA KCEHLCHDRG
      181 GESVECSCRS GYDLGPDGHS CVDRNECRSL NPPCEWGREV CVNVIGSYMC QPLRPGPNDK
      241 NRPRFVGMRD QSRLAAFRRS ESFVTVVNGT ATTPEPFVLR CPPGWTARGD QCVDVDECNL
      301 GAHDCGPLYQ CRNTQGSYRC DPKKCAEGEL QNPQTGECTS IDCPQGYYPS NGMCNDVDEC
      361 ATGNRCGPGE ECVNTAGSFR CQQKGNICTA GYAVNENTGF CDDINECLNK TICDGLMCIN
      421 LPGSYKCRCN AGYEFNEKTK RCEDVDECEK FAGHVCDLSA ECQNTIGSFV CLYINECETG
      481 AARCEQKCIN IPGSYQCICD RGYTVGADGR TCVDIDECAM WAGSGNDLCM GGCINTMGSY
      541 ICQCPQGYKI QPDGRTCVDV DECALGECQG HERICVNTLG HYKCHNIECP PNYVHDSNYK
      601 NRCNRPRSLC AGIPDSVCKS RYPVHITWQY IAIPKGIAIT SHRPTITLFT IKGPAHNDSI
      661 VQFELNLKKA IPEEPSVLLA IRPNFLLQKG KDHNSAVIAV RDTLDGPQTI EMELTLRLTK
      721 KGVNVQDGYS CLKVCKQEDA VCLGNHTKEI LYQFRALPST SFVKHPIMVS RIRTHMETPF
      781 SVSYYLDTVG KRHFIIEQDR NIGIVKLAKP IIGPAVERIR VNIHTKSRTG VILAYNVAII
      841 EVHVSQFFF
//