LOCUS WKY03986.1 1187 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-811
PROTEIN_ID WKY03986.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005179"
/note="NIPPO_CHRIV.G9019.T1"
intron_pos 22:1 (1/28)
intron_pos 60:2 (2/28)
intron_pos 122:1 (3/28)
intron_pos 162:2 (4/28)
intron_pos 199:0 (5/28)
intron_pos 230:1 (6/28)
intron_pos 263:2 (7/28)
intron_pos 326:1 (8/28)
intron_pos 371:1 (9/28)
intron_pos 422:1 (10/28)
intron_pos 476:0 (11/28)
intron_pos 516:1 (12/28)
intron_pos 569:2 (13/28)
intron_pos 609:1 (14/28)
intron_pos 654:0 (15/28)
intron_pos 680:0 (16/28)
intron_pos 705:1 (17/28)
intron_pos 758:2 (18/28)
intron_pos 779:0 (19/28)
intron_pos 820:1 (20/28)
intron_pos 860:0 (21/28)
intron_pos 884:0 (22/28)
intron_pos 921:1 (23/28)
intron_pos 964:1 (24/28)
intron_pos 1016:1 (25/28)
intron_pos 1059:1 (26/28)
intron_pos 1121:1 (27/28)
intron_pos 1163:0 (28/28)
BEGIN
1 MLTLLLLAFA AAPPLSAFAS FGPPKLLVQS PEEVWYQLDE NLSPHARPTL KCHASENAET
61 FVWYKNDEPL SIGGDIEWVR AGQSGTIQFL RPKRSHEGYY QCFVSNIFGT AVSNKVFLRL
121 GELEHFPQRP VRRIQVTEGN SLTVDCVAPR GTPPPTLFWL YRDTEQGSVI ETIRRKHITV
181 DGDGKLQFSA VELHDGRPNL VYECAAGSPV LHGEYRSGDH VQLEVLPRIG EKTVAVHKLY
241 TSPDEVTVKA GGRLRLLCIF GGNPLPEVYW SKLDGNLPKS RLKDLTSAES EFGKALIVEN
301 VHPEDAGHYE CRSGGITHSV NVRVVAAPYW DFDPPKDIEQ SEDSTTELEC LASGRPAPIV
361 RWSMNGKPLH ELPADSRRVL LDNGRVLRLS SLNHDLDTGV YQCNASNPLG YVYANAFVNV
421 KAHAPRFLMP SQRVWKVVQK STVSLDCNVE AAPDPVVRWV DADDSPLRVI EGKTQLLANN
481 TFIVREVSAA DEGLYYCNVS NKYGIARATN KLEVYKPTFF VKVPSPTKVS LEAGDSIELH
541 CEAIADPRLT INYKWTANGE LIVNNSVYNI LPDRLRLNGV RGRHSGLIDC AAVTDVDVRL
601 ASVRLTVKDV PAHPIIAPPI CTERKAVIKW KAADEHGDHI KKYTVEMQTD FKKGVWERVV
661 DEENVAKENF EVDVTLTPWV NYTFRVIAEN SHGRSDMNVQ LDDDDVMQTV SCQTRPSFPY
721 SNPAGVRAEG NQPDNLVVYW TPMDKYYWNA PNLQYLVRYK LDEPHTAWTE FLVEDSLANQ
781 TIIRDQPTFR PFVVQVRAVN AIGPSILEPE IVKGYSGEAV PASPPKNFQV ERVVNFSTVT
841 FVWEPVPESS VNGFFRGYEI EFWRDILPAR KYRIVVPSNV TTKTITTLAA NSNYTAVIRT
901 KNRHHGSEPS PEIHITMPEG LPSKVHNLRV FAVGAHAILA FWEPPKHPNG LLRGYFLSFR
961 NEKNETEETY VLHRQHAYLH EKCDSDSTYE VSVWGETSAG EGPRSSRPVR TWTSRNPDPP
1021 RFVVRNITLD SVEVEWKPSN HNVWRMPGSS FFVNFSVTDS DEHKESASVY LPNTRLTVTG
1081 LREGTSYQLT GISRDGNRIS IGQTRAVTTL SSENVSHLSQ ESLRNAAWFI AVLCAVAVAL
1141 ITILITCCCE ERRGGNYAVR RKEMEIGHQL ENEEERQFLE YQYGYKS
//