LOCUS WKY03972.1 289 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-796
PROTEIN_ID WKY03972.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005170"
/note="NIPPO_CHRIV.G9010.T2"
intron_pos 27:0 (1/7)
intron_pos 53:0 (2/7)
intron_pos 88:1 (3/7)
intron_pos 135:2 (4/7)
intron_pos 193:1 (5/7)
intron_pos 230:2 (6/7)
intron_pos 272:0 (7/7)
BEGIN
1 MSEHTEESED NEILLKDTYD EDTLTQLSSL IASGRGVRMD ETPAFNMRLI AEVKARRYLY
61 DHTDEGYNLI PWRNNAWVEI AEALDSSPEH VKTRWKTLRD RFKKEEKKEK VTGKPATWVF
121 QKPLRFIQTL PKDRSCDDCL VKDDSDNGHI SPMETAISFI KQEMSRAAEA AAEPSTAETG
181 TDSPSLTPLS QQELLYADPI AISSDPCDLP PSEKRPRVSL TDHILPIPPS FSRFLAPPIW
241 QRIEDEEAEM FGHLVALRLS KLSTKARELA KVRVLQVLYD EQFGSNSST
//