LOCUS       WKY03874.1               552 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-699
PROTEIN_ID  WKY03874.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005101"
                     /note="NIPPO_CHRIV.G8941.T1"
     intron_pos      59:1 (1/11)
     intron_pos      112:0 (2/11)
     intron_pos      181:2 (3/11)
     intron_pos      211:0 (4/11)
     intron_pos      264:0 (5/11)
     intron_pos      298:0 (6/11)
     intron_pos      347:0 (7/11)
     intron_pos      402:2 (8/11)
     intron_pos      445:2 (9/11)
     intron_pos      480:2 (10/11)
     intron_pos      511:2 (11/11)
BEGIN
        1 MDMTSHLPAS YPPAFSPNGG FGCRSEFMSP IYCQQDTSHL SDSGIYVSGS KIDTSLASDD
       61 VPLTPPGFPP SPYKNEYHDE RRPLGCLAGN AQYAGVPQYS TMRYPQNYRA QSPSAPYLLS
      121 PLTQLRLDDG AENENSYVDS RNRSLLPSWV MDGQGRIIAP LRKLLEDDLL ETFAKDKNGC
      181 TFLQANYPDE GTYEREILMK QFYEKENLFT SLCTDVFGNF FIQCVVQNAT VKEQHWITSQ
      241 LHNKLYPMCL NRYSCRVVQK IFECLPEEMK SVLVLELHSK DLVKLCTDQN ANHVVQKIMT
      301 SFPLAHWKFI VDQLIFNEEK LFSVAENKYG CRVVQLAIEL LSDTNKKTNK RRAPMLEDLM
      361 KILVANCERL ASNEFANYVI QHVIKAGPLS DYRDHLIEEC LLRNLLSLSQ EKYASHVVEK
      421 ALEFAPPSLL AEMMDEIFDG YVPHPETKKD ALDIMLFHQY GNYVVQRMLD ICCEAARAQR
      481 NGINLPDMRL RLEWLKRLEA RIAQNRNRLS RYSSGKKILG TLQQLNAFAA PVTPTRNRRS
      541 STQSTCVPSK YR
//