LOCUS WKY03831.1 307 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-657
PROTEIN_ID WKY03831.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005076"
/note="NIPPO_CHRIV.G8916.T2"
intron_pos 66:0 (1/6)
intron_pos 96:0 (2/6)
intron_pos 119:2 (3/6)
intron_pos 177:2 (4/6)
intron_pos 211:0 (5/6)
intron_pos 266:0 (6/6)
BEGIN
1 MNRLEVLRSV VTVSPFQIDQ LIFSYGGLRG AIAFGLAMSI PETIAAKQMF ITTTIVVIFF
61 TVFLQGTTIR PLVNYLNVET KDDRPVTMTE SVYNKYLDYM MSGVEDIAGQ QGHYSLRDNF
121 ERFNAKILRP ILMRNEQKKN FDASTIVRAY QKITLEDVMN LTKMQKAEHK RITTLRGHDL
181 RSTYLNKAFE NNLPKSNDMT VTPQRKQLDK FLATGENVDN VYALFSELLD RKLKELNTTR
241 DGATTDGEED IQDDYMRQMA TASNNGSNQN IRQSLNCVTL QVNNPYLRRG RRQSTGQMTE
301 RKGKSVV
//