LOCUS       WKY03819.1               725 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-643
PROTEIN_ID  WKY03819.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_005070"
                     /note="NIPPO_CHRIV.G8910.T1"
     intron_pos      20:0 (1/17)
     intron_pos      42:1 (2/17)
     intron_pos      88:1 (3/17)
     intron_pos      119:0 (4/17)
     intron_pos      170:0 (5/17)
     intron_pos      219:2 (6/17)
     intron_pos      259:2 (7/17)
     intron_pos      296:0 (8/17)
     intron_pos      356:1 (9/17)
     intron_pos      399:0 (10/17)
     intron_pos      449:1 (11/17)
     intron_pos      482:0 (12/17)
     intron_pos      542:0 (13/17)
     intron_pos      579:1 (14/17)
     intron_pos      607:2 (15/17)
     intron_pos      649:2 (16/17)
     intron_pos      707:0 (17/17)
BEGIN
        1 MGVQSKFLEV ALDPQKRRNA LIAACLGSLG VVAISYLTSK KDIRQCSLLE TNSKKKRRAF
       61 DVKFFRQLVA LLKIMVPGVF SKEAGVIGVH SAILVCRTFL SIYVAGLEGR IVKAIVQKDV
      121 RKFTLQLIKW ILVALPATFI NSMIRYFESL LGVAFRSRLT QHAYKQYFSD KTYYAVSNLD
      181 SRLQNADQCL TEDITMFSQS VAHLYSHLTK PILDIALITF TLISFAARRG SGKNVIIPSI
      241 LATLVVGATA GLLKAISPKF GHMVAEEAKR KGHLRYLHSR VITNSEEIAF YGGHEAEYKQ
      301 LTKAYGSLME QSKLIFRKRI VYIMVEQFLM KYVWSGTGMV MIALPILAAE YSSPDKSRRL
      361 EDEPDGGVSE RTRGFATAKN LLYSSADAVE RLMTSYKEVT ELAGYTSRVH EMFRVFDDVK
      421 KNTYRRALVS GEQDGAGRGE RMNLSRIEGE VIDSIDDSII LRNVPIVTPN GDVVVKNMNI
      481 EIIPGMHTLI TGPNGCGKSS LFRILGGLWP VYRGTLMRPR PDRMFYIPQR PYMTLGTLRD
      541 QVIYPDTASQ MRRKGFTDDD LAHILKIVHL SHIVEREGGW NAENDWMDVL SGGEKQRMGL
      601 ARVFYFKPQY ALLDECTSAV SIDVEGNIYQ AIKDAGITLL TVTHRPTLWK FHTHLLQYDG
      661 EGGYNLRSLN DSTIDERLSL SDEKRQIEQK LGDVPRMKER FAELCQILGE GSATVGVDSD
      721 DNEVL
//