LOCUS WKY03769.1 466 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-594
PROTEIN_ID WKY03769.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005042"
/note="NIPPO_CHRIV.G8882.T2"
BEGIN
1 MTDLRLKLQD LRYELDDAKF EIRNLRSQLE EAKAENEKFR HAIPKLPTPE RLHEMIVAQY
61 QEFYRCTKRI AHLDANIRRT RNSKRSWETR MQELKQHELA HEKTRLEFLL VRAQLRTLMA
121 TPALLFCMNS ISEEVWEAWM ETPQKNDDGK PLLQNYGAIE NAITDQLQLL EEYRSNLQTL
181 RAELEGEQQK NTFSFQDEVL EGIKKLQSSM EKTAPEFDFT SLRRILEEQE QKNSIPRQEF
241 MKAVEEIQHC IREALQNAAD IHQPKPKQEE MPGLVDDDII NDNIEFMEEL DDLEMVDESA
301 DEPAQQRNND LRQQLQDQLQ QARQGRNDLV QIIADLRNQK TCQPRRFERG FINKAIERTM
361 RCAFCSAIGS HYSDSCTEVK STQERRRLIE GQRKCTMCLE YCIGGERCAK YRTKCFHCRE
421 YYHHSALCEL PEHSEEIIRQ LVEAQDRKEA YEEQITELER NLRALG
//