LOCUS WKY03725.1 354 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-548
PROTEIN_ID WKY03725.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_005019"
/note="NIPPO_CHRIV.G8859.T2"
intron_pos 5:0 (1/7)
intron_pos 31:0 (2/7)
intron_pos 39:0 (3/7)
intron_pos 112:0 (4/7)
intron_pos 162:0 (5/7)
intron_pos 211:0 (6/7)
intron_pos 344:0 (7/7)
BEGIN
1 MLELTLTILH LIFSVSGALT LIILCGKSKK QYPNVFIEGY TNEIRPTQDS YDSRESREGY
61 GSKEGGGSHE GVGSKEPVNI RAPQQKNLVG TYDPNYQTLA GLNNADIFQN KQSGERIGES
121 GSGENVQIRA PQQDRGKKVA TFDPNYQTLA NLNNDEIFKR KDGGPPGGGA FGGGGAFKKP
181 VLGQNKLVGT FDPNYQTLAG LNNEEVFKPK GGPVGGQQFG GGRPNAWGQG GRGGFGGGGY
241 GGGGRGGFGG GGGGFGGGGG GGFGGGGGGF GGGGGAFGGG GGAFGGGGRG GFGGGGGFGR
301 GGGAPPGGGI KRPTTGQGKM VGTFDPNYQT LAGLNNDDVF APKGGGGGFG GRRW
//