LOCUS       WKY03667.1              1377 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-491
PROTEIN_ID  WKY03667.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004988"
                     /note="NIPPO_CHRIV.G8828.T1"
     intron_pos      14:0 (1/39)
     intron_pos      38:1 (2/39)
     intron_pos      77:0 (3/39)
     intron_pos      105:1 (4/39)
     intron_pos      163:0 (5/39)
     intron_pos      207:0 (6/39)
     intron_pos      242:0 (7/39)
     intron_pos      277:2 (8/39)
     intron_pos      306:0 (9/39)
     intron_pos      343:0 (10/39)
     intron_pos      390:0 (11/39)
     intron_pos      417:1 (12/39)
     intron_pos      454:1 (13/39)
     intron_pos      489:2 (14/39)
     intron_pos      519:1 (15/39)
     intron_pos      535:1 (16/39)
     intron_pos      552:2 (17/39)
     intron_pos      599:2 (18/39)
     intron_pos      631:1 (19/39)
     intron_pos      672:0 (20/39)
     intron_pos      693:0 (21/39)
     intron_pos      710:2 (22/39)
     intron_pos      736:2 (23/39)
     intron_pos      758:0 (24/39)
     intron_pos      788:0 (25/39)
     intron_pos      815:0 (26/39)
     intron_pos      849:1 (27/39)
     intron_pos      882:0 (28/39)
     intron_pos      948:1 (29/39)
     intron_pos      991:0 (30/39)
     intron_pos      1044:0 (31/39)
     intron_pos      1066:0 (32/39)
     intron_pos      1093:0 (33/39)
     intron_pos      1122:0 (34/39)
     intron_pos      1154:0 (35/39)
     intron_pos      1179:1 (36/39)
     intron_pos      1237:0 (37/39)
     intron_pos      1283:1 (38/39)
     intron_pos      1304:0 (39/39)
BEGIN
        1 MSDFFYAGKQ KEYEGFDSVN GMNLLKFREL PVGPLSRGNE PAPRSGHRIF VDDEFLYVVG
       61 GFDRTAGDQG GKIYTEVWRY NLLTQEWTEM SLRGNFPTAL ASFSLVQSYP YSNQVVLFGG
      121 TAVPFGASTS SSVHLLYVDN STNSVVSTEV PVEGEKMATY GHAMLRGSDP CTFYVVGGTT
      181 GHNFFLDVDK LTFADGKWTW TSEAEATPNM EGRYRLEAVM HNDLIFLFGG GRPDYVVELR
      241 TVTVFDTKKK TFFDLPTLPD DDLKGANWDD AYPKGRRCHS VTKWKNSVIV VGGCSADKDD
      301 DDIRHVDIYS DVWSFDLDTF QWKKMPFDLD TPVFFHDAAV TKEGCLLVWG GVRDMYSTNR
      361 TNIGQFCYLE PPSLKTLAAL SLRPYVNYKN MLEANSLRFS CVMELVRGIC DNSFDRRSMS
      421 LSLLAQNRCS FGGCHLCFLS SEDLVAHIEF THIPCIEEEY RQKANQAQCG SEENRATATP
      481 NMPLSCVYRL HRHAYNPVPC EPDVIRIAFN HNRKRTHEST SVTNVPGATV ALKKEDPLQD
      541 YGGEDLGECG VKLHSRTTHG VMLKDGGGSG GQSNGNGSRT SSHSGAHPPP TVSPTKYAAS
      601 RPYKCQQCSK RYKTTAGLSN HVEQSHKKQA GGCGTPSSTD SAPASPSPAV LDQLISQARA
      661 HGQATAAQEQ QRAQQRPLPV QVASGSAHQY GQMSTQAPLP VRSLPNTHSR FLPNKINSFH
      721 NNTIFNRDEL SLEVISGSGQ EVGRSCHLLH FKGKKILLDC GVHPGMHGVD ALPFVDFIDI
      781 EEIDLLLVAK YGGGSDRSML YTEEDLERSM EKIEVIDFHE QKEVNGIRFW PYVAGHVLGA
      841 CMFMIEIAGV RALYTGDFSR LEDRHLCAAE LPTITPDVLI SESTYGTQIH EERDEREKRF
      901 TQMVHDIVGR GGRCLIPAFA LGRAQELLLI LDEYWDAHPE LYDIPVYYAS ALAKKCMAVY
      961 QTFVSGMNQR IQKQIAVSNP FVFKHVSNLK GMEHFEDSGP CVVLASPGML QNGLSRELFE
     1021 KWCTDAKNGC IIAGYCVEGT LAKHILSEPE EIVAMNGDRL PMRLQVGYIS FSAHTDFQQT
     1081 LTFVKQLKPP HMVLVHGEMH EMSRLKAGIL RSFEEENLSI EIHNPRNTDT VRLQFQGVRK
     1141 AKVVGALAIK SNKVGDVVSG ILIKRNFNYQ VVDPKELTVF TDLSSSRLSQ RQSVYYSGSL
     1201 PLLLYSLNQL NDDAVLTAEV KPTDTTTPTH IFSVFGRAIS LQWCSLASIC ILDWESNPVN
     1261 DMYADAVLAA ILHAQTNPIP EKYLPKPEAF PKIDEAIYQT VKEVCGDEAV RAESKEAGGG
     1321 IRVEVDENVA VISSGGAQVD CEDPLLRHLL STISGKLRRC VAPEVVAGPE SMEVDEK
//