LOCUS       WKY03626.1               810 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-452
PROTEIN_ID  WKY03626.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004966"
                     /note="NIPPO_CHRIV.G8806.T2"
     intron_pos      35:0 (1/15)
     intron_pos      95:1 (2/15)
     intron_pos      156:0 (3/15)
     intron_pos      216:2 (4/15)
     intron_pos      277:1 (5/15)
     intron_pos      299:0 (6/15)
     intron_pos      341:1 (7/15)
     intron_pos      411:0 (8/15)
     intron_pos      447:1 (9/15)
     intron_pos      501:1 (10/15)
     intron_pos      545:2 (11/15)
     intron_pos      604:2 (12/15)
     intron_pos      640:0 (13/15)
     intron_pos      698:0 (14/15)
     intron_pos      752:0 (15/15)
BEGIN
        1 MRKHFVQSPT SDRVPEGSTV QLHCVAPESD PKAQLTWLKD GVELEKSADS NVIYGNDGSL
       61 IISAARLSDT GNYTCEATNI ANRRSTDPAT LSVYVNGGWS TWSSWTGACT ADCVALRRAL
      121 ENDAGSEVIP RLRRTRTCNN PAPLNGGAYC SGDEEEFRSC NLTCRLDGRW SPWSDWSPCS
      181 PTCHRFRSRT CTSPPPINGG RNCAGRELET VPCSEDYCIP SSVPQPRLAN EAAVYGGLAC
      241 VLVLLAIIMA LCTALLCKRN RGKKGSVKNI YYAENGAHVR RVLLEQQQKA LLTDECAKAP
      301 PIGSQFFTLD STCSPSPMHP SMTLRSAKSG YSGYSTNRNA GSRAALITEC SSNSSSGGGK
      361 RTLVRTSSNY SEDENYATLY DYLDEKAVGC LESSQAVLAA QVDQSGARLQ LRKCGASLLI
      421 PENALDGDRM IYLAVSDQLS DRPKLQRGES ALSSVVVLGE CEGEPRSPPR VMLKPLILSI
      481 RHCASVFPRD NWSFILYADE GFGWQRVLTV GEENLNSIMY VHMEKPGRGD GGMGWCHVML
      541 DGFARVMLAG RPRRASATVC KRVHLAAYGP SERPTSSSFE LRVYCVPETG AAMESVAKQE
      601 QHGRLLAESE HFLLNEKGDL CFCVEDVSEG FSTRGSALVE IPDTHHQWCS QNGLHCSITV
      661 CSDTNRPIED FLARIVVYQK TNNAERHVLQ VRFENSIYDK PPAEEDRVVT ADFNLPADVK
      721 EELSQLLDPP TDPDRDWRGL AKKLHIDRYI QYFATRPGCS PTTLLLDLWE ARECGSVRAA
      781 HDLLQTLRVM GRPDAVVLLE QYLSHFSYSA
//