LOCUS       WKY03572.1              1168 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-396
PROTEIN_ID  WKY03572.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004935"
                     /note="NIPPO_CHRIV.G8775.T2"
     intron_pos      25:1 (1/25)
     intron_pos      75:0 (2/25)
     intron_pos      83:0 (3/25)
     intron_pos      109:0 (4/25)
     intron_pos      171:2 (5/25)
     intron_pos      239:2 (6/25)
     intron_pos      276:0 (7/25)
     intron_pos      316:2 (8/25)
     intron_pos      344:0 (9/25)
     intron_pos      385:0 (10/25)
     intron_pos      425:0 (11/25)
     intron_pos      474:1 (12/25)
     intron_pos      519:0 (13/25)
     intron_pos      587:2 (14/25)
     intron_pos      641:2 (15/25)
     intron_pos      688:0 (16/25)
     intron_pos      732:0 (17/25)
     intron_pos      778:0 (18/25)
     intron_pos      841:0 (19/25)
     intron_pos      873:1 (20/25)
     intron_pos      907:1 (21/25)
     intron_pos      954:0 (22/25)
     intron_pos      990:0 (23/25)
     intron_pos      1047:1 (24/25)
     intron_pos      1100:0 (25/25)
BEGIN
        1 MLCFVPHPIV VELNVLLISC SISKRETPDS SDWMHRAGML CRLASPSRAA TIAARSASSV
       61 TGKVLSPISY TATQILLIRP EFARRQSMAS TAKQEPFMNA TSSVYIEQMY DAWKEDPKSV
      121 HASWDAYFRN VEGGAAPGQA YQAPPTAFGA AGVPGVPAVV PGVAVGGGFS IRREDEDMKS
      181 RLSSSPAGSQ QATSAAAVPP AGQQKLELDT NIRRGSRQKK STGKTLVYCE TSPCYRGSGP
      241 QYAASTAVAP AMAMDSSIQS ISDHLKVQLL IRSYQTRGHN IADLDPLGIN SADLDDTIPP
      301 ELELSFYGFG ERDLDKEFLL PPTTFIGGDK QTLTLKEIVH RLKHIYCKTT GLEYMHLNNL
      361 EQQDWIRQRF EAPRVTELSH DQKKVLFKRL IRSTKFEEFL AKKWPSEKRF GLEGCEVLIP
      421 AIKQVIDTSS NLGVDSVVIG MPHRGRLNVL ANVCRQPLST ILSQFSTLEP ADEGSGDVKY
      481 HLGVCIERLN RQSQRKVKIA VVANPSHLEA VDPVVMGKVR AEAFYAADEK CDRTMAILMH
      541 GDAAFSGQGV VMETFNLDDL PSYTTHGCIH IVVNNQIGFT TDPRSSRSSP YCTDVGRVVG
      601 CPIFHVNVDD PEAVMHVCMV AAEWRKTFKK DVIIDLVCYR RHGHNELDEP MFTQPLMYQK
      661 IKQMPTALEK YQEHIINEGV ANEQYVKDEL TKYGQILEDA YENAQQVTFV RNRDWLDSPW
      721 DDFFKHRDPL KLVSTGIDED NISQIISKFS SYPEGFHLHR GLERILKGRM QMLKENSLDW
      781 ACGVILLFCV LQLDWACGEA LAFGSLLKEG THVRLSGQDV ERGTFSHRHH VLHDQSIDQK
      841 TYNPLNDLHE GQAEYTVCNS SLSEYAVLGF ELGYSMVDPN SLVIWEAQFG DFANTAQCVI
      901 DQFVSSGQSK WIRQSGLVML LPHGYEGMGP EHSSARPERY LQMCNEDDEI DLEKVAFGGT
      961 FEAQQLHDTN WIVANCTTPA NIFHLLRRQV TMPFRKPAVV MTPKSLLRHP MARSPIQDFL
     1021 PGTHFQRVIP DNVEHHGSVQ RLVFCTGKVY YDLVNARKHV GKEEQVAICR IEQLSPFPYD
     1081 LIQAECQKYP GAELIWSQEE HKNMGAWGFV QPRFNSLLQS DNRIIRYTGR HPSASPATGN
     1141 KFTHLLEQKD MMSRTFDVPK KQLEGFKA
//