LOCUS WKY03570.1 304 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-394
PROTEIN_ID WKY03570.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_004934"
/note="NIPPO_CHRIV.G8774.T2"
intron_pos 102:0 (1/5)
intron_pos 132:2 (2/5)
intron_pos 193:0 (3/5)
intron_pos 215:0 (4/5)
intron_pos 282:0 (5/5)
BEGIN
1 MPSARLTCQF CGRNMEKRNL WPHLRNAHKR SEEEVQQIRE KINRESGKAK ISCPSCEELL
61 FMTYEEFANH CRVTHSEDES RGRPQDYSLV QLSFNDEKEY EKWLHEKCEI TCTSLYITRS
121 MISGSKKYQY MLCSRAGLRP SQATKIERVS RKENVHCSCF LATEFNADGS VSVKGCFGHV
181 GHDIDPALLR RKDVTTKAQR LKDACYQELS AIKQIQALTQ ANALAIAELG TYEALEALKE
241 IKAYEELASD IEMFPSSSQV PRPETAQPGA KRKLSTVSHC QRAKLREPKM PRRTTKVSVK
301 RCER
//