LOCUS       WKY03568.1               665 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-392
PROTEIN_ID  WKY03568.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004933"
                     /note="NIPPO_CHRIV.G8773.T3"
     intron_pos      193:2 (1/11)
     intron_pos      233:2 (2/11)
     intron_pos      280:2 (3/11)
     intron_pos      314:0 (4/11)
     intron_pos      354:0 (5/11)
     intron_pos      377:2 (6/11)
     intron_pos      444:1 (7/11)
     intron_pos      497:0 (8/11)
     intron_pos      553:2 (9/11)
     intron_pos      588:2 (10/11)
     intron_pos      599:2 (11/11)
BEGIN
        1 MSAVWNVFRK MTDEYGNTVA VCTVCSRSLK VPKSKTTTNL LSHLRNNHCD ELTGSLGRRC
       61 LDVPSSSSRT PVDDHRQATN RRLARLIVDG TLSIEATTSK LFREFISSLN PSYQTPSVSA
      121 LRNILDEENL RHEISTRTLV IDSATSKIVL TIDIHPTLST RTSFLVISAH LMSQNSDEKF
      181 NLILDCVPLD TESFSGYTVS ELVINCLRRY DVDVGRVSAI VGNDVQPLQE AALIPCVAHT
      241 IDLAVSDTIR SEMSSRLLGR VRCMVRELQS NWSAKMHMKS RLREIKQTET CPTVDIPSRW
      301 SSTYDMISDV LVTLPVFNET MPKLNQRPLD EEDVRLLEAM RGFLEPYRTL LKQVCARDAP
      361 CSVYLAVGRI LMTTTEKFLS QTFGEAQRFG RSLLENTTRY FGVWMGDEVL QVSALLDPRF
      421 AYLETIQSMK SWTATTEAFI AVQRNIQDEK RAKFLPAQPD DQTPSHGTSV WEVLRETREE
      481 HDFAVASAWS YEDGLRAELQ HYGALLLSSR PAFGTDPVHW WRSYMNDFPH LAGVALGYLA
      541 TPATCVDSER LLGLDSISSA GKYAGSKGHR LDRGLLLLKA NLNKDVARLL SAFRLTLFME
      601 CKSWSTAELR NYNFEEFDSD QLYDRESEPL GSSTSNRSDD EKTVVESTDS LCSYMEGDET
      661 KPKPV
//