LOCUS       WKY03544.1               607 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-369
PROTEIN_ID  WKY03544.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004921"
                     /note="NIPPO_CHRIV.G8761.T3"
     intron_pos      12:0 (1/15)
     intron_pos      54:2 (2/15)
     intron_pos      95:0 (3/15)
     intron_pos      109:0 (4/15)
     intron_pos      214:1 (5/15)
     intron_pos      252:1 (6/15)
     intron_pos      305:2 (7/15)
     intron_pos      343:1 (8/15)
     intron_pos      381:0 (9/15)
     intron_pos      406:2 (10/15)
     intron_pos      449:1 (11/15)
     intron_pos      471:1 (12/15)
     intron_pos      519:1 (13/15)
     intron_pos      567:2 (14/15)
     intron_pos      588:1 (15/15)
BEGIN
        1 MSDEAEKNCD QRDETMEEYE VADGEEQPDG ENGNEPDDLF ANHGGDPRLL DLNRCLLLSN
       61 VPSVLLNDPF DVFSNCMLDW ISQDFKVSRD AMEKIIRIPK LQPDAENPDL ALRAIISFKS
      121 RVHKHRVFAQ KSLAAESSIK LDVIDSIPRE YLDIDDDLEM ADEVDGDDEG GEEHEGDDHE
      181 QDEGEPTVKT EGAADAGNGL NESAEDGKEE EQGGENGKEE ERLPKRKEYV DEDLDAPFEV
      241 SWEGAPEFQW KLCPTPADTR KLILENVFWA DLQNIFIYRV MLKAETVDIS FPMRFNIEGS
      301 KQMYGKVTMT FQWSMQIMHE AMRHLIYVRC PQGRRIKIFL PQTTTAVKLK EEFEGKLGRV
      361 IQPTLRMRQL IVKVLPENYE LTLEAAKELF APCVPVEVEN VKDDIEQPCA IVTMANVEDT
      421 MKAHSSTSFV TIKTEDEKET KCHVFLRGVE AHFGSLITRW DKRKISAKKG AKRAATDAAG
      481 PSSVKKSRGS SSRGIGPRGS SRGGSRARPP YSGRGSYRGR GRSDPYAYPS YPTPSPYASR
      541 YAMEARMRAQ QEMELEQRMM RQQEMLDSMA AKLRERERLE GYGYRPRGAS PSYGGPSYSR
      601 SSYGSYE
//