LOCUS       WKY03543.1               619 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-368
PROTEIN_ID  WKY03543.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004921"
                     /note="NIPPO_CHRIV.G8761.T2"
     intron_pos      17:0 (1/16)
     intron_pos      59:2 (2/16)
     intron_pos      100:0 (3/16)
     intron_pos      114:0 (4/16)
     intron_pos      219:1 (5/16)
     intron_pos      257:1 (6/16)
     intron_pos      310:2 (7/16)
     intron_pos      348:1 (8/16)
     intron_pos      386:0 (9/16)
     intron_pos      411:2 (10/16)
     intron_pos      454:1 (11/16)
     intron_pos      476:1 (12/16)
     intron_pos      524:1 (13/16)
     intron_pos      572:2 (14/16)
     intron_pos      593:1 (15/16)
     intron_pos      612:2 (16/16)
BEGIN
        1 MSDEAEKNCD QVKAEQRDET MEEYEVADGE EQPDGENGNE PDDLFANHGG DPRLLDLNRC
       61 LLLSNVPSVL LNDPFDVFSN CMLDWISQDF KVSRDAMEKI IRIPKLQPDA ENPDLALRAI
      121 ISFKSRVHKH RVFAQKSLAA ESSIKLDVID SIPREYLDID DDLEMADEVD GDDEGGEEHE
      181 GDDHEQDEGE PTVKTEGAAD AGNGLNESAE DGKEEEQGGE NGKEEERLPK RKEYVDEDLD
      241 APFEVSWEGA PEFQWKLCPT PADTRKLILE NVFWADLQNI FIYRVMLKAE TVDISFPMRF
      301 NIEGSKQMYG KVTMTFQWSM QIMHEAMRHL IYVRCPQGRR IKIFLPQTTT AVKLKEEFEG
      361 KLGRVIQPTL RMRQLIVKVL PENYELTLEA AKELFAPCVP VEVENVKDDI EQPCAIVTMA
      421 NVEDTMKAHS STSFVTIKTE DEKETKCHVF LRGVEAHFGS LITRWDKRKI SAKKGAKRAA
      481 TDAAGPSSVK KSRGSSSRGI GPRGSSRGGS RARPPYSGRG SYRGRGRSDP YAYPSYPTPS
      541 PYASRYAMEA RMRAQQEMEL EQRMMRQQEM LDSMAAKLRE RERLEGYGYR PRGASPSYGG
      601 PSYSRSSYGS YDRHRSGHY
//