LOCUS       WKY03439.1               746 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-263
PROTEIN_ID  WKY03439.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004857"
                     /note="NIPPO_CHRIV.G8697.T1"
     intron_pos      38:1 (1/12)
     intron_pos      80:0 (2/12)
     intron_pos      112:1 (3/12)
     intron_pos      129:0 (4/12)
     intron_pos      205:0 (5/12)
     intron_pos      272:2 (6/12)
     intron_pos      443:0 (7/12)
     intron_pos      460:1 (8/12)
     intron_pos      619:2 (9/12)
     intron_pos      670:2 (10/12)
     intron_pos      682:1 (11/12)
     intron_pos      698:0 (12/12)
BEGIN
        1 MLDTPLRIFR CYICLEHEEK APLQELSMLI EHLAKHYDFH LFECRDCKLR FVTPFLANFH
       61 IKEGRCKREE GELADDGGPL LRCVDLDTVE FSAFCTLQNA ITKCMELMLD ELRYGEDDLI
      121 HCLNFNRATT MCPVSPEPII LKERQMQTSP PLVGAVPPSD PAPPVEKSPA TRKAEELNKA
      181 MTPVQVVDLD AEDGFSLISD DEMEQEESNA PSANVGILAD EGLSTVSNSL ERVAEVPPEQ
      241 VARIPSPVEP RIVEVLPAAV SIPSLMSVRL HDFRMTDHDH LPPRRDVRRP VVLPERPLGS
      301 FGPTGPPAPA EYAEADSSSS SVVPPPPTAP QAFFFQAMPR PQHPPPQPHV VDQRQGQARY
      361 DPVYPVPVFG PFYASGVRSN PPRPSRDHRP GQVSSSFEDT MSSLIRKQCN SYFGRTTAPE
      421 VSSSTSSGRM IPAFPDNTEP FEMAGQPLQP NLSREYLDVD MEVVQFRDNF DERMNCETMR
      481 SARKRSSRQI TPEKPIYSYG IKVLHTYDPH ADPTTPKNLR GRSTRTRGRR KSTTGASAQR
      541 SHHRHRSPSD PPARRESLPV AGIPDLPMSR SSSSDRMGSI LAVDMPSTSR HQAHRETRPR
      601 SQIELVGGNS SGEDEILESE HSSDEAQPPK AKSPVLDVGI LDIIEKTRAR LSRPLGKGNG
      661 TSLFSEWKKK FSRRSRATSP RIEFRGFNYH LPSVAQHGSG LLFASARTAK EARRWITKPR
      721 KRQEIKNIYK SIFKKKEKIA GNDSPY
//