LOCUS       WKY03391.1               494 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-219
PROTEIN_ID  WKY03391.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004829"
                     /note="NIPPO_CHRIV.G8669.T4"
     intron_pos      35:2 (1/10)
     intron_pos      83:0 (2/10)
     intron_pos      138:0 (3/10)
     intron_pos      170:2 (4/10)
     intron_pos      192:2 (5/10)
     intron_pos      284:1 (6/10)
     intron_pos      339:0 (7/10)
     intron_pos      376:1 (8/10)
     intron_pos      414:1 (9/10)
     intron_pos      469:1 (10/10)
BEGIN
        1 MLDPEQAPKS GLFQGLLKMT NDQLERENVS RVNIWVAVGQ PQVHDDVFSC FVYHPGRFLE
       61 RSGTRSEGQL PSVAQCLERC IEASSMYNFI CRSVMWKKDN HFCILSIYNR AQRVDQFRIA
      121 VNSDIDLYEN TCTYTPEAAN TVKFVSDWDL ERTTVPVPPL RNVTPRPRTP PSKKPMVEEP
      181 LRRAREEPYF SKNVFHKRQG IGTTNWFSSL QYDAIPPIPQ PKPLKPRNEL HAKTFSVPLN
      241 QPDIVVDAQV DDEGRSLFNL PSSSWRLPPI RRGPIARHFY ANTVKAASRP CFMRKAQRYL
      301 VGFEERTMNG TDLNGCFQGC LQATAFYCAS VNYSDKKKLC TLNGGNLHLN DVQLQPSKTF
      361 DYYENQCNLD QNSRKVSNMV VVRRESVERC FTVHVNTILL SLESRLLEKA ASLDHCQSEC
      421 LKSSGGGWTC GALNWVPHNK GCMLFEVGYD KRLVVPNSHT QFAVNKCAGQ SIRNATTDAD
      481 EYYDDYPAEM QGTA
//