LOCUS       WKY03363.1               663 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-188
PROTEIN_ID  WKY03363.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004812"
                     /note="NIPPO_CHRIV.G8652.T1"
     intron_pos      3:2 (1/18)
     intron_pos      24:1 (2/18)
     intron_pos      44:0 (3/18)
     intron_pos      87:1 (4/18)
     intron_pos      144:1 (5/18)
     intron_pos      171:1 (6/18)
     intron_pos      230:1 (7/18)
     intron_pos      290:0 (8/18)
     intron_pos      315:0 (9/18)
     intron_pos      367:0 (10/18)
     intron_pos      413:1 (11/18)
     intron_pos      461:0 (12/18)
     intron_pos      492:0 (13/18)
     intron_pos      541:2 (14/18)
     intron_pos      571:0 (15/18)
     intron_pos      602:0 (16/18)
     intron_pos      646:0 (17/18)
     intron_pos      662:2 (18/18)
BEGIN
        1 MLLLAAVAVL CLLARPLHST SPLDQSFISF CHNPPNFGKG EQEGNKCTVT YKIALDDVSA
       61 WAFCDIQHPF VLIKATTTES ETVCEIHTVY DCSNAEQTIG DMCYSISEAK PKDDGKKVCE
      121 GVNRNELSGL HRVASTVQQR WIAAYFSNYG IVWVANGRND IEHLLHDNLD GRRKLVNKYG
      181 RVVAGTSDHY AMITRKGSLA RLRGGTIAPM DSSTEVPALC SRRATPRQEL SAALAKRYEL
      241 FNIQSKTYKV KDKQLFKAFT VVKGAFSYSG ISKDLYYIGG GETHYKLCEG FKHGSPATTL
      301 DFDNVENFKE LLRDADVNVV AVPGRLKPHA LRERNYNCGK RDPAYNRKRD DWEYQRKTSN
      361 GTYYYQNVGP LGWKDGHPDN ACADSPRVAL VFSKDGLIDV PAFARHSVAC TFGYREPLGC
      421 AVNAQLKNDK CECIDQDEEL DRHRSQFLFL KVDEDYMKNP LQTLCFQCRA HTEYAAVVIM
      481 DASQSQISYG AAFRVPFYHF RAAFAHMKVP VRIIHAGEGG IRHDTKKFHV PVFSKELSSD
      541 TLGQSTLWKE DGSGKLALAA AFKEAIEALR YHPYARKVIH LIVFTTAEAT DYDQAQKKAK
      601 EAENYGIDIV VIHYFDGPPK ESKFDSFATT NKVFGHDYKS WHDMANAATR GLHFMYRKIC
      661 LRF
//