LOCUS       WKY03340.1               635 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-166
PROTEIN_ID  WKY03340.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004800"
                     /note="NIPPO_CHRIV.G8640.T1"
     intron_pos      36:0 (1/19)
     intron_pos      61:2 (2/19)
     intron_pos      90:0 (3/19)
     intron_pos      126:0 (4/19)
     intron_pos      163:0 (5/19)
     intron_pos      194:0 (6/19)
     intron_pos      217:2 (7/19)
     intron_pos      260:1 (8/19)
     intron_pos      280:0 (9/19)
     intron_pos      319:1 (10/19)
     intron_pos      354:1 (11/19)
     intron_pos      378:0 (12/19)
     intron_pos      430:1 (13/19)
     intron_pos      462:1 (14/19)
     intron_pos      486:0 (15/19)
     intron_pos      513:0 (16/19)
     intron_pos      544:2 (17/19)
     intron_pos      566:2 (18/19)
     intron_pos      606:1 (19/19)
BEGIN
        1 MLKLGEVSVA FEPETLQNEQ SVNVTQNFFD DVNLKICTVR NNGSLGITAK SLTEGDVATA
       61 RTKDRGPPGL VKLSPNGKLA ILQRQGNSVD VVMMERTDGH TAVEFNIATK CREVILSVDW
      121 ITNSQILFVT KQSLELFSTN EEKKTAKVLR TLNISASWSI FYAKSNLVVL AGGSNCSALQ
      181 PFIIQQGLFT RLKSFDVDSA VPPNENLLEK DVTITSIYGK VCVMILRYGA GGSNATDLVV
      241 YELSADPTTP SKMKYSLTLG CSGGFGVHVI DNLIIVHHQV LAKSMVFDVA LSPNRPTHSP
      301 LITVSIGMIL RIFFVTFCCA SFHAIFIEPS PLCQPPPALY VPLWSMFQPD IIVDPVAGMM
      361 YKLCINYTYA HKEIVDKCTL IEFLIHRTDQ KSLVLSTLLE CLRAKALRLR HVRKIFDLMV
      421 EKFSLSSGPD ASKFQLIQQR VEHLRIEQAE MQSSIFIPFM ANPRYAADVM LQFLRSLHRY
      481 CIPIEAYLLE LVVESLAKSG EMGKLHQLVT YKVITDSKPL AFLLLSYEAR CPSLFQSGVD
      541 ILARQKACDE IVEVLLERGH VADAIRYLDA QHMETNSPKF LSIAKQQDRI VQYAVLTNLM
      601 SRKSKDEGAK HERGLASLYT EDEVKEAVHE VSKAV
//