LOCUS       WKY03314.1               649 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-140
PROTEIN_ID  WKY03314.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004786"
                     /note="NIPPO_CHRIV.G8626.T1"
     intron_pos      36:2 (1/14)
     intron_pos      259:2 (2/14)
     intron_pos      334:1 (3/14)
     intron_pos      365:2 (4/14)
     intron_pos      408:2 (5/14)
     intron_pos      436:2 (6/14)
     intron_pos      464:2 (7/14)
     intron_pos      492:2 (8/14)
     intron_pos      524:1 (9/14)
     intron_pos      568:1 (10/14)
     intron_pos      586:1 (11/14)
     intron_pos      613:2 (12/14)
     intron_pos      625:1 (13/14)
     intron_pos      644:0 (14/14)
BEGIN
        1 MLAECCRSAA SVAKRFISAV LQTFWTTYYF AYFLLKPHPE WKCDKHPTET QRVCCVEAQK
       61 VESKQSTHQI SLQSTALKTN EPKGFAKISF WTWVKGSAMR ATNAVALYAR RIGRLCYRLL
      121 CKIGRALRTV GQYVWAILKA LFIPNVKSMP LTPSTPKPFQ TKPLEPPSFN KVEFNPEELL
      181 EGNAAAFVEP IVPGKSELEK TTHQMITEDP SNLSYQPEAR MPPPIAMPRH IGSPEAVDMF
      241 NSAQRFTDTS LDVTQREMSP YVEENTIREP SPPSRVPPAP PPPPSKPTRI DSSYGREDVD
      301 PWENEAHTAN QTGVKKEPPG IGKLPANVMA ELHGTQKMRQ EREASVQREM TQSCHPDMAQ
      361 WNNESRYDRS ATATPFRASS VGPTMRKLEQ VVSRLEDSSD NEAQYVFRAK PSDYIMGKSV
      421 FLPVEEAERM RDTINRTSRP VTPAHSVVSG RVTPSLTDFY GYGSEDGGGR RRARTVGPIG
      481 RESMSRTSGF YATSPVTSHT VRRTPVPYDR GANFAYDRDQ VTQGAVNYQV RRWPPVSNAS
      541 GVEIARDNWV EKMAGHSEDG LITTMCRNPL INPELQSQPW SSFPRGVVER KTEDNWKWHD
      601 DHGHVVDEKK QKTHWSRTVE LLPTGDTRFQ DVSRQYNRNY VVESIVRNY
//