LOCUS       WKY03286.1              1264 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-112
PROTEIN_ID  WKY03286.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004771"
                     /note="NIPPO_CHRIV.G8611.T3"
     intron_pos      23:0 (1/31)
     intron_pos      62:2 (2/31)
     intron_pos      77:2 (3/31)
     intron_pos      105:2 (4/31)
     intron_pos      170:0 (5/31)
     intron_pos      198:2 (6/31)
     intron_pos      238:0 (7/31)
     intron_pos      265:0 (8/31)
     intron_pos      319:2 (9/31)
     intron_pos      350:2 (10/31)
     intron_pos      544:0 (11/31)
     intron_pos      556:0 (12/31)
     intron_pos      593:0 (13/31)
     intron_pos      638:0 (14/31)
     intron_pos      699:0 (15/31)
     intron_pos      770:0 (16/31)
     intron_pos      791:0 (17/31)
     intron_pos      838:0 (18/31)
     intron_pos      862:0 (19/31)
     intron_pos      888:0 (20/31)
     intron_pos      914:0 (21/31)
     intron_pos      943:0 (22/31)
     intron_pos      970:0 (23/31)
     intron_pos      1006:0 (24/31)
     intron_pos      1029:0 (25/31)
     intron_pos      1063:0 (26/31)
     intron_pos      1086:0 (27/31)
     intron_pos      1115:0 (28/31)
     intron_pos      1147:2 (29/31)
     intron_pos      1194:0 (30/31)
     intron_pos      1242:2 (31/31)
BEGIN
        1 MACGPKCMAF MMLMSIWGII FLSILGGLYY NQSVGLFEDL PDEDKKACNV ADWDCRKKEF
       61 VKLYQQNAYN CWVAAGGNAS AHAAHLSMSA MQVPGLHQLA SFAHRMYDVL VGGVWVPSAI
      121 ASHFKNTDQA PFSYTKPNLK FQSQKSEEKK KENEQQEEPR TEEATMEQKA SPPLLITERG
      181 MAQPVHLQYN SPMPIYSKEA AEEQYQQQIG EGTSPIPLPL GDKHFDPEKS ATLKFIKEGN
      241 EGHFGEHFFE QIANAEAPRV FHKEEPEWAR YARAKSERAR SRTPADPSQH QTPATTPTQT
      301 RQHERPRADS PHEFIEKTRT YTNTVQPRWG PAYYQTQSHS LRRGHSEPRE IHPGYECGGL
      361 DYTKGLHFPP ASNEYYEVRS RRAQHDQHRP RSGYELGGVS YARGYVSPGP YHGHGPDPPR
      421 LRPKYSADPR SPCNSYYAPN VDEVDANLLV GDTISNQKIS HEVRHVNQNE FGTSFAPPTG
      481 FKRDHMYVKR SPAPPEPVTY SLSANKARYA SANGLSSTQH QQRSHQEKVW QDYQQQNASG
      541 GKESYNQYPP LAPHYVFTTE PNWSRTVQQR RNAWERMAYD TDARVSLPAS AKVPAPQPPA
      601 WHNKAARTHN VWQQAADTMS QGVTQSYIQQ PQSTFETSQT SYHQSGAVPY QSQYQDEQRH
      661 SQYSSSGQEH QQSQQQQGYS SSQHTETHTT SHSVPVQQTR SAVNGGSNAE LLLNTGYNAN
      721 QIEYLRDHLD KYRAGPAYQA PNGQNYEQMK EASYSKSYSS SSQQQNVSQS AAPIALPAPA
      781 QNYSYSTETR TSSQTAAPAS TGYQQQQQQS SYSHHSSHTN ETNARAVPVV PEKSNFEESK
      841 RVYMEERRTA TSTPTPRVTF KDMHLREPFP LNGMHSMSMP SLQHSEEMER FHKLFSSENA
      901 RTIPVQETHR ESEAKHFEKR HTSKEETRTT TIPVRPVQSA YQESSYHRSE SSKQESSRAI
      961 PIQSASNAQE SHAKTYISNT QAVPLAVQPT QNYSTSSYTE THSNQPPMVM HSPGGSYKSY
     1021 QSSHYSKQEK TTSTTTSNQP AAAVTQTTNL PITKTTSYNY QQQSVPTAPA PVQMSQSSFT
     1081 SHSEKSTTGG APIALPAPAA RSNYQASMSS HREESHREET SRPVSQLSQY SEQKHYKRNM
     1141 EEKTETRTIP AATNAFHSDS SRNYSSQDVF NKKEEMNETL PPGSISNTHA NTQGGYRDQQ
     1201 GHDVSYKRET QTAVDPGKEY ALLKEEEKRV VETDLEPGVI SRHVTTKYYK KKTVTDTTTT
     1261 TTPQ
//