LOCUS       WKY03266.1               540 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-89
PROTEIN_ID  WKY03266.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004758"
                     /note="NIPPO_CHRIV.G8598.T1"
     intron_pos      58:0 (1/13)
     intron_pos      94:0 (2/13)
     intron_pos      118:0 (3/13)
     intron_pos      159:0 (4/13)
     intron_pos      202:2 (5/13)
     intron_pos      267:0 (6/13)
     intron_pos      293:2 (7/13)
     intron_pos      332:0 (8/13)
     intron_pos      359:2 (9/13)
     intron_pos      401:2 (10/13)
     intron_pos      448:0 (11/13)
     intron_pos      497:2 (12/13)
     intron_pos      525:0 (13/13)
BEGIN
        1 MQGEHFYIMP LRAANKYQWF YMRYQYPPEI LMLCLGHFAA LLDVERFTNL RMANPTEEKA
       61 LETEETMSLV SKSIEAFHAD EVEEKGGVTL ELPEKSTRSQ KTDVVVSMDT AFERKLAELE
      121 KEDWYHGCLP YEDIVGLLKE DGDFLLRGLE AEGGRNTMAC LTVRWEGKTM DFPIHTLLTE
      181 NQGHTFTLDG KRTSNDIMGL VKSHYRLQQE INGVMLKNPV MKAQWELTKN KITLVKKIGA
      241 GEGGEVWQGT LREASNKPPI DVAIKMTKVV AENKHIVDAM YKEARLMRQY KHKNVVAFYG
      301 IVQDKPESAM IVMELIDGGN LKMYLRKNKD TIPVKSRISF AIDVAVGLTY LHTKGCMHRD
      361 IACRNCLIDL KNNVVKITDF GLSKVAESYN IPPTEKLPIR WQAPEVVLTR FYTEKSDVYS
      421 YGILLWEIFH NGSTPYKQFT NKEVRLKVSN PQFRPSIDPN VPIVAYRVMK ACWRGNPKKR
      481 PKMADAARYL IHAKPELLLP RGASVRSSST TKDKPTKEAR RNRSKNLRRQ KPSKSGTSTQ
//