LOCUS       WKY03246.1              1222 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-68
PROTEIN_ID  WKY03246.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004748"
                     /note="NIPPO_CHRIV.G8588.T1"
     intron_pos      19:0 (1/27)
     intron_pos      38:0 (2/27)
     intron_pos      65:1 (3/27)
     intron_pos      101:0 (4/27)
     intron_pos      134:0 (5/27)
     intron_pos      188:1 (6/27)
     intron_pos      237:2 (7/27)
     intron_pos      274:0 (8/27)
     intron_pos      320:2 (9/27)
     intron_pos      362:2 (10/27)
     intron_pos      400:2 (11/27)
     intron_pos      434:1 (12/27)
     intron_pos      475:2 (13/27)
     intron_pos      543:1 (14/27)
     intron_pos      591:2 (15/27)
     intron_pos      661:1 (16/27)
     intron_pos      696:2 (17/27)
     intron_pos      735:2 (18/27)
     intron_pos      770:0 (19/27)
     intron_pos      816:1 (20/27)
     intron_pos      852:0 (21/27)
     intron_pos      897:0 (22/27)
     intron_pos      925:0 (23/27)
     intron_pos      1004:0 (24/27)
     intron_pos      1060:0 (25/27)
     intron_pos      1119:1 (26/27)
     intron_pos      1177:0 (27/27)
BEGIN
        1 MDQWCQSLMA VKQKSPEKAG AADAMLEGTS GAHQWYQMNH HRPTFCNYCR EKLSGLTWHG
       61 WSCEICKMKA HKKCMLSITE KCKWTTEFTV PSHLQYISPE NSIVPHQWVE GNLAMSSKCV
      121 VCEKVCGSVL KLADWRCLWC ACCVHSSCLP QLGRGCSLGA TSLSVIPPLA VKDVSEQGIA
      181 QIRADAIGGE CGGGSPLLVL VNSKSGDNQG QRMIRKFKRL LNPIQVFDII ATGPDFALSF
      241 FDALDCFRVL VCGGDGTVGW VLGAFDRLGL HNKCQLAILP LGTGNDLARV LGWGHAFYDD
      301 TQLPQLIRTF ERAHTRMLDR WSVLAIEGPQ AIAVRQYEET ITKKVRAVME ADDPGDVFRA
      361 VKSLCETVRG LMEKIATTFH KVEQWEREAG RLPSDPITEK CSTLLQKLDV LMSSLSHEEE
      421 RVEESGFEPE DDERTASEER QRRDSLVGRA NSLKKALKDI MNIAERGIDQ HNRATGAAAK
      481 RDRFRKKRSK TTPSVLKVSS SNVSSSSACT PPASPSLQNR PRHIDYLTVR EAESQLSQTS
      541 GIGFSPSQSS NPGLSTFEMG DGTHETPYSL PNGCSDQDVK DTDDEPRYKL SFGRVVPPTP
      601 SETREPSTAG ETDRPAVDDS HIERLSHDCL FKPHSDCELY SAEAETSTDI KLSHSDSSIY
      661 DRTTEGSSCS RNLDPSYTRP RLKDCKKMHT LSTMKRGLLS TNLAGGSLIA EVLLLNARVL
      721 GLGDVSGSRE CHTPLEQYRE LKVMNNYFGI GLDAKIALEF HNKREESDKT RSRSRLFMWY
      781 GILGGKELMY RTYRNLDQRI RLECDGVPID LPSLQGIVIL NIPSYSGGAN FWGSAKDDTF
      841 TAQSFDDRLL EVVALFGVIH VATSRVPNVV RLQNHRIAQC RHIRIVIMGH DPIPVQVDGE
      901 PWLQPPGIMQ IVHKNRAQLL VRNPAFDAAL KKWEEHKERT TAPSTPTSMS TSLAAPGEDV
      961 PFARRASEFV QLVESEIAQL GVSSGFLEAL EAAAISVRAA EEETDYNGID GQALREEALA
     1021 AIELVVDRLE DHFGWTEHTR VPAGQPRLGP APLFTFEVHG DEPEHWRYVL CSIRQEISRE
     1081 EAVLKELRIV ETGQRKRSRL TDWITRKWRR RSGAPSTHVT TWSVDDVASW LNSLGLSQYA
     1141 WQFKANDIRG HELIHLERAD MKDLGVLKIG HMKRLQSAIA ELREKEVELR RESRRSGRKG
     1201 ASLSVERAPI EPAPELPSLS SI
//